Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Sp140Q6NSQ5 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sp140Q6NSQ5 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sp140Q6NSQ5 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sp140Q6NSQ5 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sp140Q6NSQ5 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sp140Q6NSQ5 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Sp140Q6NSQ5 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.13□□□□□ -0.15
Sp140Q6NSQ5 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sp140Q6NSQ5 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sp140Q6NSQ5 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sp140Q6NSQ5 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sp140Q6NSQ5 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.13□□□□□ -0.15
Sp140Q6NSQ5 Gm26308-201ENSMUST00000157768 69 ntBASIC14.13□□□□□ -0.15
Sp140Q6NSQ5 Gm38294-201ENSMUST00000192831 381 ntBASIC14.13□□□□□ -0.15
Sp140Q6NSQ5 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.13□□□□□ -0.15
Sp140Q6NSQ5 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sp140Q6NSQ5 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.13□□□□□ -0.15
Sp140Q6NSQ5 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sp140Q6NSQ5 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sp140Q6NSQ5 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sp140Q6NSQ5 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sp140Q6NSQ5 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sp140Q6NSQ5 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sp140Q6NSQ5 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sp140Q6NSQ5 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sp140Q6NSQ5 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.13□□□□□ -0.15
Sp140Q6NSQ5 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sp140Q6NSQ5 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sp140Q6NSQ5 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sp140Q6NSQ5 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sp140Q6NSQ5 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.13□□□□□ -0.15
Sp140Q6NSQ5 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Sp140Q6NSQ5 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sp140Q6NSQ5 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sp140Q6NSQ5 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sp140Q6NSQ5 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sp140Q6NSQ5 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sp140Q6NSQ5 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
Sp140Q6NSQ5 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sp140Q6NSQ5 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sp140Q6NSQ5 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Sp140Q6NSQ5 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.12□□□□□ -0.15
Sp140Q6NSQ5 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sp140Q6NSQ5 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sp140Q6NSQ5 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sp140Q6NSQ5 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sp140Q6NSQ5 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sp140Q6NSQ5 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sp140Q6NSQ5 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.12□□□□□ -0.15
Sp140Q6NSQ5 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Sp140Q6NSQ5 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sp140Q6NSQ5 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sp140Q6NSQ5 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sp140Q6NSQ5 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sp140Q6NSQ5 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sp140Q6NSQ5 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Sp140Q6NSQ5 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sp140Q6NSQ5 Gm27622-201ENSMUST00000183779 60 ntBASIC14.12□□□□□ -0.15
Sp140Q6NSQ5 Gm27533-201ENSMUST00000183800 152 ntBASIC14.12□□□□□ -0.15
Sp140Q6NSQ5 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.12□□□□□ -0.15
Sp140Q6NSQ5 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.12□□□□□ -0.15
Sp140Q6NSQ5 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.12□□□□□ -0.15
Sp140Q6NSQ5 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.12□□□□□ -0.15
Sp140Q6NSQ5 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.12□□□□□ -0.15
Sp140Q6NSQ5 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sp140Q6NSQ5 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sp140Q6NSQ5 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sp140Q6NSQ5 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Sp140Q6NSQ5 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sp140Q6NSQ5 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sp140Q6NSQ5 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sp140Q6NSQ5 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sp140Q6NSQ5 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sp140Q6NSQ5 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sp140Q6NSQ5 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sp140Q6NSQ5 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Sp140Q6NSQ5 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.12□□□□□ -0.15
Sp140Q6NSQ5 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sp140Q6NSQ5 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sp140Q6NSQ5 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Sp140Q6NSQ5 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sp140Q6NSQ5 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.11□□□□□ -0.15
Sp140Q6NSQ5 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sp140Q6NSQ5 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sp140Q6NSQ5 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Sp140Q6NSQ5 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Sp140Q6NSQ5 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sp140Q6NSQ5 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sp140Q6NSQ5 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sp140Q6NSQ5 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.11□□□□□ -0.15
Sp140Q6NSQ5 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.11□□□□□ -0.15
Sp140Q6NSQ5 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sp140Q6NSQ5 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sp140Q6NSQ5 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sp140Q6NSQ5 Gm14701-201ENSMUST00000117156 348 ntBASIC14.11□□□□□ -0.15
Sp140Q6NSQ5 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Sp140Q6NSQ5 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.11□□□□□ -0.15
Sp140Q6NSQ5 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.11□□□□□ -0.15
Sp140Q6NSQ5 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms