Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav5d-4Q5R1F6 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav5d-4Q5R1F6 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav5d-4Q5R1F6 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav5d-4Q5R1F6 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav5d-4Q5R1F6 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav5d-4Q5R1F6 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav5d-4Q5R1F6 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trav5d-4Q5R1F6 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav5d-4Q5R1F6 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav5d-4Q5R1F6 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav5d-4Q5R1F6 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav5d-4Q5R1F6 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav5d-4Q5R1F6 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav5d-4Q5R1F6 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav5d-4Q5R1F6 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav5d-4Q5R1F6 Gm13517-201ENSMUST00000120782 1495 ntBASIC11.98□□□□□ -0.49
Trav5d-4Q5R1F6 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav5d-4Q5R1F6 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Trav5d-4Q5R1F6 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav5d-4Q5R1F6 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav5d-4Q5R1F6 Mir449b-201ENSMUST00000104833 80 ntBASIC11.98□□□□□ -0.49
Trav5d-4Q5R1F6 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav5d-4Q5R1F6 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav5d-4Q5R1F6 Gm26308-201ENSMUST00000157768 69 ntBASIC11.98□□□□□ -0.49
Trav5d-4Q5R1F6 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav5d-4Q5R1F6 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC11.98□□□□□ -0.49
Trav5d-4Q5R1F6 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav5d-4Q5R1F6 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trav5d-4Q5R1F6 Dupd1-202ENSMUST00000224735 548 ntBASIC11.98□□□□□ -0.49
Trav5d-4Q5R1F6 AC139350.3-201ENSMUST00000226151 420 ntBASIC11.98□□□□□ -0.49
Trav5d-4Q5R1F6 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav5d-4Q5R1F6 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav5d-4Q5R1F6 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav5d-4Q5R1F6 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav5d-4Q5R1F6 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav5d-4Q5R1F6 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav5d-4Q5R1F6 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav5d-4Q5R1F6 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav5d-4Q5R1F6 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav5d-4Q5R1F6 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav5d-4Q5R1F6 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav5d-4Q5R1F6 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav5d-4Q5R1F6 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav5d-4Q5R1F6 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trav5d-4Q5R1F6 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Trav5d-4Q5R1F6 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11.97□□□□□ -0.49
Trav5d-4Q5R1F6 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav5d-4Q5R1F6 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav5d-4Q5R1F6 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav5d-4Q5R1F6 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav5d-4Q5R1F6 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav5d-4Q5R1F6 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav5d-4Q5R1F6 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav5d-4Q5R1F6 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav5d-4Q5R1F6 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav5d-4Q5R1F6 Gm45667-201ENSMUST00000210380 1316 ntBASIC11.97□□□□□ -0.49
Trav5d-4Q5R1F6 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav5d-4Q5R1F6 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav5d-4Q5R1F6 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav5d-4Q5R1F6 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trav5d-4Q5R1F6 Gm8410-201ENSMUST00000117225 605 ntBASIC11.97□□□□□ -0.49
Trav5d-4Q5R1F6 Gm6415-201ENSMUST00000118488 348 ntBASIC11.97□□□□□ -0.49
Trav5d-4Q5R1F6 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav5d-4Q5R1F6 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav5d-4Q5R1F6 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC11.97□□□□□ -0.49
Trav5d-4Q5R1F6 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav5d-4Q5R1F6 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav5d-4Q5R1F6 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC11.97□□□□□ -0.49
Trav5d-4Q5R1F6 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav5d-4Q5R1F6 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav5d-4Q5R1F6 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav5d-4Q5R1F6 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav5d-4Q5R1F6 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav5d-4Q5R1F6 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav5d-4Q5R1F6 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav5d-4Q5R1F6 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav5d-4Q5R1F6 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trav5d-4Q5R1F6 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav5d-4Q5R1F6 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav5d-4Q5R1F6 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav5d-4Q5R1F6 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.96□□□□□ -0.49
Trav5d-4Q5R1F6 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav5d-4Q5R1F6 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav5d-4Q5R1F6 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav5d-4Q5R1F6 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav5d-4Q5R1F6 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav5d-4Q5R1F6 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav5d-4Q5R1F6 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav5d-4Q5R1F6 Gm24543-201ENSMUST00000103867 82 ntBASIC11.96□□□□□ -0.49
Trav5d-4Q5R1F6 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Trav5d-4Q5R1F6 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav5d-4Q5R1F6 Gm14701-201ENSMUST00000117156 348 ntBASIC11.96□□□□□ -0.49
Trav5d-4Q5R1F6 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC11.96□□□□□ -0.49
Trav5d-4Q5R1F6 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC11.96□□□□□ -0.49
Trav5d-4Q5R1F6 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav5d-4Q5R1F6 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav5d-4Q5R1F6 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC11.96□□□□□ -0.49
Trav5d-4Q5R1F6 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav5d-4Q5R1F6 CT030704.2-201ENSMUST00000228887 494 ntBASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms