Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.41□□□□□ -0.1
Trim80Q3V061 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim80Q3V061 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim80Q3V061 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim80Q3V061 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim80Q3V061 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim80Q3V061 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim80Q3V061 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim80Q3V061 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim80Q3V061 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim80Q3V061 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.41□□□□□ -0.1
Trim80Q3V061 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim80Q3V061 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.41□□□□□ -0.1
Trim80Q3V061 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim80Q3V061 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.41□□□□□ -0.1
Trim80Q3V061 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.41□□□□□ -0.1
Trim80Q3V061 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim80Q3V061 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim80Q3V061 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim80Q3V061 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim80Q3V061 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.41□□□□□ -0.1
Trim80Q3V061 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Trim80Q3V061 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.41□□□□□ -0.1
Trim80Q3V061 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trim80Q3V061 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trim80Q3V061 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trim80Q3V061 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim80Q3V061 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim80Q3V061 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim80Q3V061 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim80Q3V061 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim80Q3V061 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trim80Q3V061 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim80Q3V061 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim80Q3V061 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim80Q3V061 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim80Q3V061 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim80Q3V061 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim80Q3V061 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trim80Q3V061 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim80Q3V061 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim80Q3V061 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim80Q3V061 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim80Q3V061 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.4□□□□□ -0.1
Trim80Q3V061 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim80Q3V061 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim80Q3V061 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim80Q3V061 Gm13597-201ENSMUST00000121239 375 ntBASIC14.4□□□□□ -0.1
Trim80Q3V061 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.4□□□□□ -0.1
Trim80Q3V061 Gm9726-201ENSMUST00000180321 678 ntBASIC14.4□□□□□ -0.1
Trim80Q3V061 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.4□□□□□ -0.1
Trim80Q3V061 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim80Q3V061 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.4□□□□□ -0.1
Trim80Q3V061 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim80Q3V061 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim80Q3V061 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim80Q3V061 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trim80Q3V061 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim80Q3V061 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Trim80Q3V061 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Trim80Q3V061 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim80Q3V061 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim80Q3V061 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim80Q3V061 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.39□□□□□ -0.11
Trim80Q3V061 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim80Q3V061 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim80Q3V061 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim80Q3V061 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim80Q3V061 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.39□□□□□ -0.11
Trim80Q3V061 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim80Q3V061 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim80Q3V061 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim80Q3V061 Gm5177-201ENSMUST00000183092 997 ntBASIC14.39□□□□□ -0.11
Trim80Q3V061 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trim80Q3V061 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.39□□□□□ -0.11
Trim80Q3V061 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim80Q3V061 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim80Q3V061 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim80Q3V061 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim80Q3V061 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim80Q3V061 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim80Q3V061 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim80Q3V061 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim80Q3V061 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim80Q3V061 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim80Q3V061 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC14.39□□□□□ -0.11
Trim80Q3V061 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim80Q3V061 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim80Q3V061 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim80Q3V061 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.39□□□□□ -0.11
Trim80Q3V061 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim80Q3V061 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim80Q3V061 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim80Q3V061 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim80Q3V061 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trim80Q3V061 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim80Q3V061 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.38□□□□□ -0.11
Trim80Q3V061 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim80Q3V061 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim80Q3V061 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms