Protein–RNA interactions for Protein: Q04742

Emx1, Homeobox protein EMX1, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Emx1Q04742 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Emx1Q04742 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Emx1Q04742 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Emx1Q04742 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Emx1Q04742 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13□□□□□ -0.33
Emx1Q04742 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Emx1Q04742 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Emx1Q04742 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Emx1Q04742 Gm14752-201ENSMUST00000120719 2075 ntBASIC13□□□□□ -0.33
Emx1Q04742 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Emx1Q04742 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.99□□□□□ -0.33
Emx1Q04742 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.99□□□□□ -0.33
Emx1Q04742 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.99□□□□□ -0.33
Emx1Q04742 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Emx1Q04742 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.99□□□□□ -0.33
Emx1Q04742 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Emx1Q04742 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.99□□□□□ -0.33
Emx1Q04742 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Emx1Q04742 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Emx1Q04742 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Emx1Q04742 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
Emx1Q04742 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Emx1Q04742 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Emx1Q04742 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Emx1Q04742 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Emx1Q04742 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.99□□□□□ -0.33
Emx1Q04742 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Emx1Q04742 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.99□□□□□ -0.33
Emx1Q04742 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.99□□□□□ -0.33
Emx1Q04742 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Emx1Q04742 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Emx1Q04742 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.99□□□□□ -0.33
Emx1Q04742 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Emx1Q04742 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Emx1Q04742 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Emx1Q04742 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.99□□□□□ -0.33
Emx1Q04742 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Emx1Q04742 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Emx1Q04742 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.99□□□□□ -0.33
Emx1Q04742 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Emx1Q04742 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Emx1Q04742 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Emx1Q04742 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Emx1Q04742 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Emx1Q04742 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Emx1Q04742 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Emx1Q04742 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Emx1Q04742 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Emx1Q04742 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Emx1Q04742 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Emx1Q04742 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Emx1Q04742 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Emx1Q04742 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Emx1Q04742 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Emx1Q04742 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Emx1Q04742 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.98□□□□□ -0.33
Emx1Q04742 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.98□□□□□ -0.33
Emx1Q04742 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Emx1Q04742 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Emx1Q04742 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Emx1Q04742 Olfr286-202ENSMUST00000205305 969 ntBASIC12.98□□□□□ -0.33
Emx1Q04742 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC12.98□□□□□ -0.33
Emx1Q04742 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Emx1Q04742 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.98□□□□□ -0.33
Emx1Q04742 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Emx1Q04742 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Emx1Q04742 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Emx1Q04742 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Emx1Q04742 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Emx1Q04742 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Emx1Q04742 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Emx1Q04742 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Emx1Q04742 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Emx1Q04742 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.97□□□□□ -0.33
Emx1Q04742 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Emx1Q04742 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.97□□□□□ -0.33
Emx1Q04742 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Emx1Q04742 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Emx1Q04742 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Emx1Q04742 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Emx1Q04742 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Emx1Q04742 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Emx1Q04742 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Emx1Q04742 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Emx1Q04742 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Emx1Q04742 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Emx1Q04742 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.97□□□□□ -0.33
Emx1Q04742 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Emx1Q04742 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Emx1Q04742 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Emx1Q04742 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Emx1Q04742 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Emx1Q04742 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Emx1Q04742 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Emx1Q04742 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Emx1Q04742 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Emx1Q04742 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Emx1Q04742 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.97□□□□□ -0.33
Emx1Q04742 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Emx1Q04742 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms