Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gabpb1Q00420 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gabpb1Q00420 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.14□□□□□ -0.15
Gabpb1Q00420 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Gabpb1Q00420 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.13□□□□□ -0.15
Gabpb1Q00420 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gabpb1Q00420 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gabpb1Q00420 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.13□□□□□ -0.15
Gabpb1Q00420 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Gabpb1Q00420 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Gabpb1Q00420 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gabpb1Q00420 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gabpb1Q00420 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gabpb1Q00420 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.13□□□□□ -0.15
Gabpb1Q00420 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gabpb1Q00420 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.13□□□□□ -0.15
Gabpb1Q00420 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.13□□□□□ -0.15
Gabpb1Q00420 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.13□□□□□ -0.15
Gabpb1Q00420 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.13□□□□□ -0.15
Gabpb1Q00420 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gabpb1Q00420 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Gabpb1Q00420 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gabpb1Q00420 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.13□□□□□ -0.15
Gabpb1Q00420 Gm21470-201ENSMUST00000187680 696 ntBASIC14.13□□□□□ -0.15
Gabpb1Q00420 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.13□□□□□ -0.15
Gabpb1Q00420 Gm46209-201ENSMUST00000217912 553 ntBASIC14.13□□□□□ -0.15
Gabpb1Q00420 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gabpb1Q00420 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Gabpb1Q00420 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gabpb1Q00420 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gabpb1Q00420 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gabpb1Q00420 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gabpb1Q00420 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gabpb1Q00420 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gabpb1Q00420 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Gabpb1Q00420 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Gabpb1Q00420 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gabpb1Q00420 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Gabpb1Q00420 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gabpb1Q00420 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gabpb1Q00420 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gabpb1Q00420 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Gabpb1Q00420 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gabpb1Q00420 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gabpb1Q00420 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gabpb1Q00420 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Gabpb1Q00420 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gabpb1Q00420 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gabpb1Q00420 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Gabpb1Q00420 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.12□□□□□ -0.15
Gabpb1Q00420 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Gabpb1Q00420 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Gabpb1Q00420 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gabpb1Q00420 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Gabpb1Q00420 Mir698-201ENSMUST00000102164 109 ntBASIC14.12□□□□□ -0.15
Gabpb1Q00420 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gabpb1Q00420 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.12□□□□□ -0.15
Gabpb1Q00420 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gabpb1Q00420 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.12□□□□□ -0.15
Gabpb1Q00420 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Gabpb1Q00420 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gabpb1Q00420 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Gabpb1Q00420 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.12□□□□□ -0.15
Gabpb1Q00420 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gabpb1Q00420 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Gabpb1Q00420 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gabpb1Q00420 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gabpb1Q00420 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gabpb1Q00420 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Gabpb1Q00420 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Gabpb1Q00420 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Gabpb1Q00420 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gabpb1Q00420 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gabpb1Q00420 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gabpb1Q00420 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gabpb1Q00420 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Gabpb1Q00420 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gabpb1Q00420 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gabpb1Q00420 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gabpb1Q00420 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gabpb1Q00420 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gabpb1Q00420 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Gabpb1Q00420 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Gabpb1Q00420 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gabpb1Q00420 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Gabpb1Q00420 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Gabpb1Q00420 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gabpb1Q00420 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gabpb1Q00420 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gabpb1Q00420 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Gabpb1Q00420 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gabpb1Q00420 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gabpb1Q00420 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gabpb1Q00420 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.11□□□□□ -0.15
Gabpb1Q00420 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.11□□□□□ -0.15
Gabpb1Q00420 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.11□□□□□ -0.15
Gabpb1Q00420 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gabpb1Q00420 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Gabpb1Q00420 Gm22175-201ENSMUST00000175007 78 ntBASIC14.11□□□□□ -0.15
Gabpb1Q00420 Gm4804-201ENSMUST00000182234 999 ntBASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms