Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Nkx2-3P97334 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx2-3P97334 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
Nkx2-3P97334 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx2-3P97334 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx2-3P97334 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx2-3P97334 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx2-3P97334 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Nkx2-3P97334 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx2-3P97334 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx2-3P97334 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx2-3P97334 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx2-3P97334 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx2-3P97334 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx2-3P97334 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx2-3P97334 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC17.36■□□□□ 0.37
Nkx2-3P97334 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Nkx2-3P97334 Gm19184-201ENSMUST00000196798 928 ntBASIC17.36■□□□□ 0.37
Nkx2-3P97334 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC17.36■□□□□ 0.37
Nkx2-3P97334 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx2-3P97334 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC17.36■□□□□ 0.37
Nkx2-3P97334 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx2-3P97334 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx2-3P97334 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx2-3P97334 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx2-3P97334 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx2-3P97334 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx2-3P97334 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.36■□□□□ 0.37
Nkx2-3P97334 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx2-3P97334 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx2-3P97334 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx2-3P97334 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx2-3P97334 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-3P97334 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-3P97334 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-3P97334 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-3P97334 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-3P97334 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-3P97334 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-3P97334 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC17.35■□□□□ 0.37
Nkx2-3P97334 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-3P97334 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-3P97334 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-3P97334 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC17.35■□□□□ 0.37
Nkx2-3P97334 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-3P97334 Gm15770-201ENSMUST00000117498 584 ntBASIC17.35■□□□□ 0.37
Nkx2-3P97334 Gm13886-201ENSMUST00000117876 1183 ntBASIC17.35■□□□□ 0.37
Nkx2-3P97334 Gm12134-201ENSMUST00000122109 520 ntBASIC17.35■□□□□ 0.37
Nkx2-3P97334 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Nkx2-3P97334 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-3P97334 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Nkx2-3P97334 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Nkx2-3P97334 Gm2639-201ENSMUST00000156881 1297 ntBASIC17.35■□□□□ 0.37
Nkx2-3P97334 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-3P97334 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-3P97334 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-3P97334 Snora73a-201ENSMUST00000082453 205 ntBASIC17.35■□□□□ 0.37
Nkx2-3P97334 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Nkx2-3P97334 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-3P97334 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-3P97334 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-3P97334 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-3P97334 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-3P97334 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC17.35■□□□□ 0.37
Nkx2-3P97334 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-3P97334 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Nkx2-3P97334 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-3P97334 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-3P97334 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC17.35■□□□□ 0.37
Nkx2-3P97334 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-3P97334 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-3P97334 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Nkx2-3P97334 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx2-3P97334 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx2-3P97334 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx2-3P97334 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx2-3P97334 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Nkx2-3P97334 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx2-3P97334 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx2-3P97334 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Nkx2-3P97334 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx2-3P97334 Gm14350-201ENSMUST00000116642 640 ntBASIC17.34■□□□□ 0.37
Nkx2-3P97334 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx2-3P97334 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx2-3P97334 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx2-3P97334 Gm25261-201ENSMUST00000157416 134 ntBASIC17.34■□□□□ 0.37
Nkx2-3P97334 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC17.34■□□□□ 0.37
Nkx2-3P97334 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC17.34■□□□□ 0.37
Nkx2-3P97334 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx2-3P97334 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC17.34■□□□□ 0.37
Nkx2-3P97334 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Nkx2-3P97334 Gm38002-201ENSMUST00000193255 180 ntBASIC17.34■□□□□ 0.37
Nkx2-3P97334 Gm37497-201ENSMUST00000195830 798 ntBASIC17.34■□□□□ 0.37
Nkx2-3P97334 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx2-3P97334 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC17.34■□□□□ 0.37
Nkx2-3P97334 Gm43118-201ENSMUST00000199149 775 ntBASIC17.34■□□□□ 0.37
Nkx2-3P97334 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC17.34■□□□□ 0.37
Nkx2-3P97334 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC17.34■□□□□ 0.37
Nkx2-3P97334 Tyms-ps-201ENSMUST00000219550 915 ntBASIC17.34■□□□□ 0.37
Nkx2-3P97334 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms