Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.87□□□□□ -0.19
Ldb1P70662 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.87□□□□□ -0.19
Ldb1P70662 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.87□□□□□ -0.19
Ldb1P70662 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ldb1P70662 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.87□□□□□ -0.19
Ldb1P70662 Gm37714-201ENSMUST00000194742 342 ntBASIC13.87□□□□□ -0.19
Ldb1P70662 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.87□□□□□ -0.19
Ldb1P70662 Gm46209-201ENSMUST00000217912 553 ntBASIC13.87□□□□□ -0.19
Ldb1P70662 Gm6888-201ENSMUST00000221983 706 ntBASIC13.87□□□□□ -0.19
Ldb1P70662 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Ldb1P70662 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ldb1P70662 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ldb1P70662 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ldb1P70662 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ldb1P70662 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ldb1P70662 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ldb1P70662 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ldb1P70662 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ldb1P70662 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ldb1P70662 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ldb1P70662 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ldb1P70662 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Ldb1P70662 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ldb1P70662 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ldb1P70662 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ldb1P70662 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ldb1P70662 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ldb1P70662 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ldb1P70662 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ldb1P70662 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ldb1P70662 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ldb1P70662 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.86□□□□□ -0.19
Ldb1P70662 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ldb1P70662 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ldb1P70662 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Ldb1P70662 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Ldb1P70662 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ldb1P70662 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ldb1P70662 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ldb1P70662 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.86□□□□□ -0.19
Ldb1P70662 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Ldb1P70662 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.86□□□□□ -0.19
Ldb1P70662 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Ldb1P70662 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ldb1P70662 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Ldb1P70662 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.86□□□□□ -0.19
Ldb1P70662 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.86□□□□□ -0.19
Ldb1P70662 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.86□□□□□ -0.19
Ldb1P70662 Gm17837-201ENSMUST00000186435 985 ntBASIC13.86□□□□□ -0.19
Ldb1P70662 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.86□□□□□ -0.19
Ldb1P70662 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ldb1P70662 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.86□□□□□ -0.19
Ldb1P70662 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ldb1P70662 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ldb1P70662 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Ldb1P70662 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ldb1P70662 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ldb1P70662 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ldb1P70662 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ldb1P70662 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ldb1P70662 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ldb1P70662 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ldb1P70662 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ldb1P70662 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.86□□□□□ -0.19
Ldb1P70662 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.86□□□□□ -0.19
Ldb1P70662 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Ldb1P70662 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Ldb1P70662 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ldb1P70662 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Ldb1P70662 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Ldb1P70662 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ldb1P70662 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Ldb1P70662 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ldb1P70662 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ldb1P70662 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.86□□□□□ -0.19
Ldb1P70662 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ldb1P70662 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.86□□□□□ -0.19
Ldb1P70662 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.85□□□□□ -0.19
Ldb1P70662 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Ldb1P70662 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ldb1P70662 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ldb1P70662 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ldb1P70662 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ldb1P70662 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ldb1P70662 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Ldb1P70662 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ldb1P70662 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ldb1P70662 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ldb1P70662 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ldb1P70662 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ldb1P70662 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ldb1P70662 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ldb1P70662 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ldb1P70662 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ldb1P70662 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ldb1P70662 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ldb1P70662 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Ldb1P70662 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ldb1P70662 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.85□□□□□ -0.19
Ldb1P70662 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms