Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC18.65■□□□□ 0.58
Nphp4P59240 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nphp4P59240 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nphp4P59240 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Nphp4P59240 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nphp4P59240 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nphp4P59240 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nphp4P59240 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Nphp4P59240 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC18.65■□□□□ 0.58
Nphp4P59240 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nphp4P59240 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nphp4P59240 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC18.65■□□□□ 0.58
Nphp4P59240 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC18.65■□□□□ 0.58
Nphp4P59240 Gm42693-201ENSMUST00000196779 631 ntBASIC18.65■□□□□ 0.58
Nphp4P59240 Gm43818-201ENSMUST00000200605 466 ntBASIC18.65■□□□□ 0.58
Nphp4P59240 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nphp4P59240 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Nphp4P59240 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nphp4P59240 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nphp4P59240 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nphp4P59240 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nphp4P59240 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nphp4P59240 Gm10339-203ENSMUST00000225409 1671 ntBASIC18.64■□□□□ 0.57
Nphp4P59240 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nphp4P59240 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nphp4P59240 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nphp4P59240 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nphp4P59240 Gm26927-201ENSMUST00000182385 965 ntBASIC18.64■□□□□ 0.57
Nphp4P59240 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC18.64■□□□□ 0.57
Nphp4P59240 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC18.64■□□□□ 0.57
Nphp4P59240 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nphp4P59240 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nphp4P59240 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nphp4P59240 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nphp4P59240 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nphp4P59240 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nphp4P59240 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nphp4P59240 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nphp4P59240 AC167013.2-201ENSMUST00000228520 2684 ntBASIC18.63■□□□□ 0.57
Nphp4P59240 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nphp4P59240 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Nphp4P59240 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nphp4P59240 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nphp4P59240 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nphp4P59240 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC18.63■□□□□ 0.57
Nphp4P59240 AC096628.2-201ENSMUST00000225443 1413 ntBASIC18.63■□□□□ 0.57
Nphp4P59240 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nphp4P59240 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nphp4P59240 Gm5187-201ENSMUST00000117317 991 ntBASIC18.63■□□□□ 0.57
Nphp4P59240 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC18.63■□□□□ 0.57
Nphp4P59240 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nphp4P59240 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC18.63■□□□□ 0.57
Nphp4P59240 Gm18054-201ENSMUST00000207539 555 ntBASIC18.63■□□□□ 0.57
Nphp4P59240 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC18.63■□□□□ 0.57
Nphp4P59240 Gm2824-203ENSMUST00000226189 1228 ntBASIC18.63■□□□□ 0.57
Nphp4P59240 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nphp4P59240 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nphp4P59240 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Nphp4P59240 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nphp4P59240 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nphp4P59240 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
Nphp4P59240 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nphp4P59240 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nphp4P59240 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC18.62■□□□□ 0.57
Nphp4P59240 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nphp4P59240 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
Nphp4P59240 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Nphp4P59240 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nphp4P59240 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC18.62■□□□□ 0.57
Nphp4P59240 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nphp4P59240 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Nphp4P59240 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC18.62■□□□□ 0.57
Nphp4P59240 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Nphp4P59240 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nphp4P59240 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC18.62■□□□□ 0.57
Nphp4P59240 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nphp4P59240 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nphp4P59240 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Nphp4P59240 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC18.62■□□□□ 0.57
Nphp4P59240 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC18.62■□□□□ 0.57
Nphp4P59240 Gm6447-201ENSMUST00000118905 835 ntBASIC18.62■□□□□ 0.57
Nphp4P59240 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC18.62■□□□□ 0.57
Nphp4P59240 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nphp4P59240 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC18.62■□□□□ 0.57
Nphp4P59240 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Nphp4P59240 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nphp4P59240 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nphp4P59240 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nphp4P59240 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nphp4P59240 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nphp4P59240 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nphp4P59240 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nphp4P59240 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nphp4P59240 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nphp4P59240 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nphp4P59240 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Nphp4P59240 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nphp4P59240 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nphp4P59240 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nphp4P59240 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms