Protein–RNA interactions for Protein: P54728

Rad23b, UV excision repair protein RAD23 homolog B, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad23bP54728 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rad23bP54728 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Rad23bP54728 Gm8099-201ENSMUST00000200510 742 ntBASIC17.14■□□□□ 0.33
Rad23bP54728 AC132384.14-201ENSMUST00000219346 1147 ntBASIC17.14■□□□□ 0.33
Rad23bP54728 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rad23bP54728 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rad23bP54728 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rad23bP54728 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rad23bP54728 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rad23bP54728 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rad23bP54728 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rad23bP54728 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
Rad23bP54728 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rad23bP54728 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rad23bP54728 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rad23bP54728 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rad23bP54728 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Rad23bP54728 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Rad23bP54728 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Rad23bP54728 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rad23bP54728 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rad23bP54728 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rad23bP54728 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rad23bP54728 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rad23bP54728 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.13■□□□□ 0.33
Rad23bP54728 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rad23bP54728 Gm2606-201ENSMUST00000100754 1002 ntBASIC17.13■□□□□ 0.33
Rad23bP54728 Mir686-201ENSMUST00000102174 109 ntBASIC17.13■□□□□ 0.33
Rad23bP54728 Gm8213-201ENSMUST00000118191 441 ntBASIC17.13■□□□□ 0.33
Rad23bP54728 Gm12537-201ENSMUST00000119266 1002 ntBASIC17.13■□□□□ 0.33
Rad23bP54728 Gm12070-201ENSMUST00000119551 1002 ntBASIC17.13■□□□□ 0.33
Rad23bP54728 Gm12671-201ENSMUST00000119978 1002 ntBASIC17.13■□□□□ 0.33
Rad23bP54728 Gm13292-201ENSMUST00000120014 1000 ntBASIC17.13■□□□□ 0.33
Rad23bP54728 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rad23bP54728 Gm20482-202ENSMUST00000174729 825 ntBASIC17.13■□□□□ 0.33
Rad23bP54728 Gm25927-201ENSMUST00000175058 117 ntBASIC17.13■□□□□ 0.33
Rad23bP54728 Gm10359-201ENSMUST00000180167 1002 ntBASIC17.13■□□□□ 0.33
Rad23bP54728 Gm12033-201ENSMUST00000180654 1002 ntBASIC17.13■□□□□ 0.33
Rad23bP54728 Gm5559-201ENSMUST00000180755 1002 ntBASIC17.13■□□□□ 0.33
Rad23bP54728 Gm7293-201ENSMUST00000216682 1007 ntBASIC17.13■□□□□ 0.33
Rad23bP54728 AC154462.2-201ENSMUST00000227519 370 ntBASIC17.13■□□□□ 0.33
Rad23bP54728 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rad23bP54728 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rad23bP54728 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rad23bP54728 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rad23bP54728 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rad23bP54728 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rad23bP54728 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rad23bP54728 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
Rad23bP54728 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rad23bP54728 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rad23bP54728 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rad23bP54728 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rad23bP54728 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rad23bP54728 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rad23bP54728 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.12■□□□□ 0.33
Rad23bP54728 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rad23bP54728 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Rad23bP54728 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rad23bP54728 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC17.12■□□□□ 0.33
Rad23bP54728 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC17.12■□□□□ 0.33
Rad23bP54728 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rad23bP54728 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC17.12■□□□□ 0.33
Rad23bP54728 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rad23bP54728 Gm11628-201ENSMUST00000117568 171 ntBASIC17.12■□□□□ 0.33
Rad23bP54728 Gm12882-201ENSMUST00000121696 517 ntBASIC17.12■□□□□ 0.33
Rad23bP54728 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC17.12■□□□□ 0.33
Rad23bP54728 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC17.12■□□□□ 0.33
Rad23bP54728 Gm6152-201ENSMUST00000151704 340 ntBASIC17.12■□□□□ 0.33
Rad23bP54728 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Rad23bP54728 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC17.12■□□□□ 0.33
Rad23bP54728 Gm34767-201ENSMUST00000191813 1062 ntBASIC17.12■□□□□ 0.33
Rad23bP54728 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rad23bP54728 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Rad23bP54728 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rad23bP54728 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Rad23bP54728 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC17.12■□□□□ 0.33
Rad23bP54728 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rad23bP54728 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Rad23bP54728 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rad23bP54728 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC17.12■□□□□ 0.33
Rad23bP54728 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rad23bP54728 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rad23bP54728 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
Rad23bP54728 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rad23bP54728 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Rad23bP54728 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rad23bP54728 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rad23bP54728 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rad23bP54728 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rad23bP54728 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rad23bP54728 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rad23bP54728 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
Rad23bP54728 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Rad23bP54728 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC17.11■□□□□ 0.33
Rad23bP54728 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rad23bP54728 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC17.11■□□□□ 0.33
Rad23bP54728 Gm45186-201ENSMUST00000206874 478 ntBASIC17.11■□□□□ 0.33
Rad23bP54728 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rad23bP54728 Tyms-ps-201ENSMUST00000219550 915 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms