Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox2P48432 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sox2P48432 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sox2P48432 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox2P48432 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sox2P48432 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox2P48432 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Sox2P48432 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Sox2P48432 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox2P48432 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox2P48432 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sox2P48432 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox2P48432 Gm12882-201ENSMUST00000121696 517 ntBASIC13.04□□□□□ -0.32
Sox2P48432 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Sox2P48432 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sox2P48432 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Sox2P48432 Gm17968-201ENSMUST00000194902 784 ntBASIC13.04□□□□□ -0.32
Sox2P48432 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox2P48432 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Sox2P48432 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.04□□□□□ -0.32
Sox2P48432 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Sox2P48432 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox2P48432 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Sox2P48432 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox2P48432 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox2P48432 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Sox2P48432 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Sox2P48432 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sox2P48432 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Sox2P48432 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sox2P48432 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox2P48432 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.04□□□□□ -0.32
Sox2P48432 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Sox2P48432 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Sox2P48432 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sox2P48432 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox2P48432 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox2P48432 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.03□□□□□ -0.32
Sox2P48432 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sox2P48432 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox2P48432 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.03□□□□□ -0.32
Sox2P48432 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.03□□□□□ -0.32
Sox2P48432 Gm28659-201ENSMUST00000188013 759 ntBASIC13.03□□□□□ -0.32
Sox2P48432 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Sox2P48432 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.03□□□□□ -0.32
Sox2P48432 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.03□□□□□ -0.32
Sox2P48432 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sox2P48432 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sox2P48432 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox2P48432 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.03□□□□□ -0.32
Sox2P48432 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox2P48432 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.03□□□□□ -0.32
Sox2P48432 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox2P48432 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox2P48432 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox2P48432 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Sox2P48432 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox2P48432 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox2P48432 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox2P48432 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox2P48432 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox2P48432 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox2P48432 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox2P48432 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox2P48432 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox2P48432 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Sox2P48432 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Sox2P48432 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.02□□□□□ -0.33
Sox2P48432 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox2P48432 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sox2P48432 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Sox2P48432 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox2P48432 Gm12350-201ENSMUST00000121208 462 ntBASIC13.02□□□□□ -0.33
Sox2P48432 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.02□□□□□ -0.33
Sox2P48432 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sox2P48432 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox2P48432 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox2P48432 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.02□□□□□ -0.33
Sox2P48432 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox2P48432 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox2P48432 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox2P48432 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Sox2P48432 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox2P48432 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox2P48432 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox2P48432 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.02□□□□□ -0.33
Sox2P48432 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.02□□□□□ -0.33
Sox2P48432 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox2P48432 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sox2P48432 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.02□□□□□ -0.33
Sox2P48432 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox2P48432 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox2P48432 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Sox2P48432 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox2P48432 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox2P48432 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox2P48432 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Sox2P48432 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Sox2P48432 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox2P48432 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms