Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC13.36□□□□□ -0.27
Sox18P43680 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox18P43680 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Sox18P43680 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox18P43680 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.36□□□□□ -0.27
Sox18P43680 Gm19184-201ENSMUST00000196798 928 ntBASIC13.36□□□□□ -0.27
Sox18P43680 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sox18P43680 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.36□□□□□ -0.27
Sox18P43680 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.36□□□□□ -0.27
Sox18P43680 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.36□□□□□ -0.27
Sox18P43680 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.36□□□□□ -0.27
Sox18P43680 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sox18P43680 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sox18P43680 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox18P43680 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox18P43680 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Sox18P43680 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox18P43680 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Sox18P43680 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox18P43680 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox18P43680 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox18P43680 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.35□□□□□ -0.27
Sox18P43680 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sox18P43680 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox18P43680 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox18P43680 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox18P43680 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox18P43680 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sox18P43680 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox18P43680 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox18P43680 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox18P43680 Gm15240-201ENSMUST00000118156 720 ntBASIC13.35□□□□□ -0.27
Sox18P43680 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Sox18P43680 Gm15808-201ENSMUST00000119046 604 ntBASIC13.35□□□□□ -0.27
Sox18P43680 Gm11524-201ENSMUST00000119349 807 ntBASIC13.35□□□□□ -0.27
Sox18P43680 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.35□□□□□ -0.27
Sox18P43680 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sox18P43680 Gm22993-201ENSMUST00000175423 254 ntBASIC13.35□□□□□ -0.27
Sox18P43680 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Sox18P43680 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.35□□□□□ -0.27
Sox18P43680 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sox18P43680 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.35□□□□□ -0.27
Sox18P43680 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.35□□□□□ -0.27
Sox18P43680 Gm43068-201ENSMUST00000201095 1273 ntBASIC13.35□□□□□ -0.27
Sox18P43680 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.35□□□□□ -0.27
Sox18P43680 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Sox18P43680 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sox18P43680 AC093022.1-201ENSMUST00000226949 1072 ntBASIC13.35□□□□□ -0.27
Sox18P43680 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sox18P43680 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sox18P43680 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox18P43680 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Sox18P43680 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Sox18P43680 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox18P43680 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sox18P43680 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Sox18P43680 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Sox18P43680 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sox18P43680 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox18P43680 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox18P43680 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox18P43680 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox18P43680 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox18P43680 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox18P43680 Gm13612-201ENSMUST00000119276 390 ntBASIC13.34□□□□□ -0.27
Sox18P43680 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.34□□□□□ -0.27
Sox18P43680 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Sox18P43680 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sox18P43680 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.34□□□□□ -0.27
Sox18P43680 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.34□□□□□ -0.27
Sox18P43680 Gm9726-201ENSMUST00000180321 678 ntBASIC13.34□□□□□ -0.27
Sox18P43680 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.34□□□□□ -0.27
Sox18P43680 Gm38188-201ENSMUST00000192879 856 ntBASIC13.34□□□□□ -0.27
Sox18P43680 Gm43692-201ENSMUST00000198236 1062 ntBASIC13.34□□□□□ -0.27
Sox18P43680 Gm38671-201ENSMUST00000200573 130 ntBASIC13.34□□□□□ -0.27
Sox18P43680 Gm18905-201ENSMUST00000205454 928 ntBASIC13.34□□□□□ -0.27
Sox18P43680 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Sox18P43680 Gm19309-201ENSMUST00000218295 205 ntBASIC13.34□□□□□ -0.27
Sox18P43680 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC13.34□□□□□ -0.27
Sox18P43680 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox18P43680 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Sox18P43680 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox18P43680 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Sox18P43680 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox18P43680 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox18P43680 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox18P43680 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox18P43680 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sox18P43680 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox18P43680 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox18P43680 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sox18P43680 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox18P43680 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox18P43680 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Sox18P43680 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Sox18P43680 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Sox18P43680 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox18P43680 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Sox18P43680 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox18P43680 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms