Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Abca1P41233 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Abca1P41233 Gm12742-201ENSMUST00000117326 410 ntBASIC11.59□□□□□ -0.55
Abca1P41233 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.59□□□□□ -0.55
Abca1P41233 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.59□□□□□ -0.55
Abca1P41233 AC165157.4-201ENSMUST00000220587 139 ntBASIC11.59□□□□□ -0.55
Abca1P41233 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Abca1P41233 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Abca1P41233 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Abca1P41233 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Abca1P41233 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Abca1P41233 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Abca1P41233 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Abca1P41233 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Abca1P41233 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Abca1P41233 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Abca1P41233 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Abca1P41233 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Abca1P41233 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Abca1P41233 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Abca1P41233 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Abca1P41233 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
Abca1P41233 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.58□□□□□ -0.55
Abca1P41233 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.58□□□□□ -0.55
Abca1P41233 Gm12957-201ENSMUST00000117835 377 ntBASIC11.58□□□□□ -0.55
Abca1P41233 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Abca1P41233 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Abca1P41233 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC11.58□□□□□ -0.55
Abca1P41233 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Abca1P41233 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Abca1P41233 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC11.58□□□□□ -0.55
Abca1P41233 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Abca1P41233 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Abca1P41233 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Abca1P41233 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Abca1P41233 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Abca1P41233 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Abca1P41233 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Abca1P41233 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
Abca1P41233 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC11.58□□□□□ -0.56
Abca1P41233 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Abca1P41233 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Abca1P41233 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Abca1P41233 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Abca1P41233 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Abca1P41233 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Abca1P41233 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Abca1P41233 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.58□□□□□ -0.56
Abca1P41233 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.58□□□□□ -0.56
Abca1P41233 AC121598.1-201ENSMUST00000228224 1019 ntBASIC11.58□□□□□ -0.56
Abca1P41233 AC114008.2-201ENSMUST00000227699 1347 ntBASIC11.58□□□□□ -0.56
Abca1P41233 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Abca1P41233 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Abca1P41233 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Abca1P41233 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Abca1P41233 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Abca1P41233 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Abca1P41233 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Abca1P41233 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Abca1P41233 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Abca1P41233 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Abca1P41233 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Abca1P41233 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Abca1P41233 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Abca1P41233 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Abca1P41233 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
Abca1P41233 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Abca1P41233 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Abca1P41233 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Abca1P41233 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
Abca1P41233 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Abca1P41233 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.57□□□□□ -0.56
Abca1P41233 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.57□□□□□ -0.56
Abca1P41233 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.57□□□□□ -0.56
Abca1P41233 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC11.57□□□□□ -0.56
Abca1P41233 AC123645.1-201ENSMUST00000228469 605 ntBASIC11.57□□□□□ -0.56
Abca1P41233 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Abca1P41233 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Abca1P41233 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Abca1P41233 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Abca1P41233 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Abca1P41233 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Abca1P41233 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Abca1P41233 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Abca1P41233 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Abca1P41233 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.57□□□□□ -0.56
Abca1P41233 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Abca1P41233 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Abca1P41233 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Abca1P41233 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Abca1P41233 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC11.57□□□□□ -0.56
Abca1P41233 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Abca1P41233 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Abca1P41233 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Abca1P41233 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC11.57□□□□□ -0.56
Abca1P41233 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Abca1P41233 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Abca1P41233 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Abca1P41233 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Abca1P41233 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms