Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Upk2P38575 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk2P38575 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk2P38575 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk2P38575 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk2P38575 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
Upk2P38575 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk2P38575 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk2P38575 Gm14767-201ENSMUST00000121559 586 ntBASIC12.21□□□□□ -0.45
Upk2P38575 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.21□□□□□ -0.45
Upk2P38575 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Upk2P38575 Gm27680-201ENSMUST00000184192 160 ntBASIC12.21□□□□□ -0.45
Upk2P38575 Gm44344-201ENSMUST00000200287 129 ntBASIC12.21□□□□□ -0.45
Upk2P38575 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC12.21□□□□□ -0.45
Upk2P38575 Gm44719-201ENSMUST00000206404 149 ntBASIC12.21□□□□□ -0.45
Upk2P38575 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk2P38575 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk2P38575 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Upk2P38575 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Upk2P38575 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk2P38575 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Upk2P38575 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Upk2P38575 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Upk2P38575 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Upk2P38575 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Upk2P38575 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Upk2P38575 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Upk2P38575 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Upk2P38575 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.21□□□□□ -0.46
Upk2P38575 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Upk2P38575 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Upk2P38575 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.21□□□□□ -0.46
Upk2P38575 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Upk2P38575 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Upk2P38575 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Upk2P38575 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk2P38575 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk2P38575 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.2□□□□□ -0.46
Upk2P38575 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk2P38575 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Upk2P38575 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk2P38575 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk2P38575 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk2P38575 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Upk2P38575 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk2P38575 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.2□□□□□ -0.46
Upk2P38575 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Upk2P38575 Mir698-201ENSMUST00000102164 109 ntBASIC12.2□□□□□ -0.46
Upk2P38575 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Upk2P38575 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Upk2P38575 Gm15393-201ENSMUST00000120499 219 ntBASIC12.2□□□□□ -0.46
Upk2P38575 Gm13616-201ENSMUST00000120600 222 ntBASIC12.2□□□□□ -0.46
Upk2P38575 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Upk2P38575 Gm4804-201ENSMUST00000182234 999 ntBASIC12.2□□□□□ -0.46
Upk2P38575 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.2□□□□□ -0.46
Upk2P38575 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Upk2P38575 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.2□□□□□ -0.46
Upk2P38575 Gm6888-201ENSMUST00000221983 706 ntBASIC12.2□□□□□ -0.46
Upk2P38575 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk2P38575 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk2P38575 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC12.2□□□□□ -0.46
Upk2P38575 Mir497b-201ENSMUST00000093601 125 ntBASIC12.2□□□□□ -0.46
Upk2P38575 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk2P38575 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk2P38575 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.2□□□□□ -0.46
Upk2P38575 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Upk2P38575 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk2P38575 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk2P38575 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Upk2P38575 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk2P38575 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Upk2P38575 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk2P38575 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk2P38575 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk2P38575 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Upk2P38575 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.2□□□□□ -0.46
Upk2P38575 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Upk2P38575 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk2P38575 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk2P38575 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk2P38575 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Upk2P38575 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk2P38575 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Upk2P38575 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Upk2P38575 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk2P38575 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk2P38575 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk2P38575 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk2P38575 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk2P38575 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk2P38575 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk2P38575 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Upk2P38575 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Upk2P38575 Gm12585-201ENSMUST00000117307 290 ntBASIC12.19□□□□□ -0.46
Upk2P38575 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.19□□□□□ -0.46
Upk2P38575 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk2P38575 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk2P38575 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Upk2P38575 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk2P38575 Gm3436-201ENSMUST00000179930 840 ntBASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms