Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LdlrP35951 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LdlrP35951 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LdlrP35951 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LdlrP35951 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LdlrP35951 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.86□□□□□ -0.19
LdlrP35951 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
LdlrP35951 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LdlrP35951 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LdlrP35951 Gm24158-201ENSMUST00000175263 71 ntBASIC13.86□□□□□ -0.19
LdlrP35951 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.86□□□□□ -0.19
LdlrP35951 Gm43438-201ENSMUST00000198133 379 ntBASIC13.86□□□□□ -0.19
LdlrP35951 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
LdlrP35951 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.86□□□□□ -0.19
LdlrP35951 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LdlrP35951 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LdlrP35951 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.86□□□□□ -0.19
LdlrP35951 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.86□□□□□ -0.19
LdlrP35951 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LdlrP35951 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
LdlrP35951 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
LdlrP35951 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LdlrP35951 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.86□□□□□ -0.19
LdlrP35951 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LdlrP35951 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LdlrP35951 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LdlrP35951 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LdlrP35951 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.86□□□□□ -0.19
LdlrP35951 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LdlrP35951 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.86□□□□□ -0.19
LdlrP35951 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LdlrP35951 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LdlrP35951 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LdlrP35951 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.86□□□□□ -0.19
LdlrP35951 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LdlrP35951 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.85□□□□□ -0.19
LdlrP35951 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LdlrP35951 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
LdlrP35951 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.85□□□□□ -0.19
LdlrP35951 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LdlrP35951 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LdlrP35951 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LdlrP35951 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LdlrP35951 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LdlrP35951 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LdlrP35951 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LdlrP35951 Gm12882-201ENSMUST00000121696 517 ntBASIC13.85□□□□□ -0.19
LdlrP35951 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LdlrP35951 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
LdlrP35951 Gm27920-201ENSMUST00000183953 96 ntBASIC13.85□□□□□ -0.19
LdlrP35951 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.85□□□□□ -0.19
LdlrP35951 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.85□□□□□ -0.19
LdlrP35951 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
LdlrP35951 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LdlrP35951 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.85□□□□□ -0.19
LdlrP35951 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
LdlrP35951 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.85□□□□□ -0.19
LdlrP35951 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
LdlrP35951 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
LdlrP35951 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LdlrP35951 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LdlrP35951 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.85□□□□□ -0.19
LdlrP35951 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LdlrP35951 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LdlrP35951 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LdlrP35951 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LdlrP35951 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.85□□□□□ -0.19
LdlrP35951 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LdlrP35951 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LdlrP35951 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LdlrP35951 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
LdlrP35951 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LdlrP35951 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LdlrP35951 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.85□□□□□ -0.19
LdlrP35951 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.85□□□□□ -0.19
LdlrP35951 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LdlrP35951 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LdlrP35951 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LdlrP35951 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.84□□□□□ -0.19
LdlrP35951 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LdlrP35951 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LdlrP35951 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
LdlrP35951 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LdlrP35951 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LdlrP35951 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LdlrP35951 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.84□□□□□ -0.19
LdlrP35951 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LdlrP35951 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
LdlrP35951 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LdlrP35951 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LdlrP35951 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LdlrP35951 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LdlrP35951 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
LdlrP35951 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.84□□□□□ -0.19
LdlrP35951 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LdlrP35951 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LdlrP35951 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.84□□□□□ -0.19
LdlrP35951 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LdlrP35951 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.84□□□□□ -0.19
LdlrP35951 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms