Protein–RNA interactions for Protein: P35278

Rab5c, Ras-related protein Rab-5C, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab5cP35278 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rab5cP35278 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rab5cP35278 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Rab5cP35278 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rab5cP35278 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rab5cP35278 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rab5cP35278 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rab5cP35278 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rab5cP35278 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11.32□□□□□ -0.6
Rab5cP35278 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rab5cP35278 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rab5cP35278 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rab5cP35278 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rab5cP35278 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.32□□□□□ -0.6
Rab5cP35278 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rab5cP35278 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rab5cP35278 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rab5cP35278 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rab5cP35278 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rab5cP35278 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rab5cP35278 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rab5cP35278 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rab5cP35278 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rab5cP35278 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rab5cP35278 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Rab5cP35278 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rab5cP35278 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rab5cP35278 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rab5cP35278 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.31□□□□□ -0.6
Rab5cP35278 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rab5cP35278 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rab5cP35278 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Rab5cP35278 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC11.31□□□□□ -0.6
Rab5cP35278 Gm8520-201ENSMUST00000186517 868 ntBASIC11.31□□□□□ -0.6
Rab5cP35278 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC11.31□□□□□ -0.6
Rab5cP35278 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rab5cP35278 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rab5cP35278 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rab5cP35278 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rab5cP35278 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Rab5cP35278 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.31□□□□□ -0.6
Rab5cP35278 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rab5cP35278 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rab5cP35278 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rab5cP35278 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rab5cP35278 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rab5cP35278 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rab5cP35278 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rab5cP35278 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rab5cP35278 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Rab5cP35278 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rab5cP35278 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rab5cP35278 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rab5cP35278 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Rab5cP35278 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Rab5cP35278 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rab5cP35278 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.3□□□□□ -0.6
Rab5cP35278 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab5cP35278 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.3□□□□□ -0.6
Rab5cP35278 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab5cP35278 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rab5cP35278 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.3□□□□□ -0.6
Rab5cP35278 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab5cP35278 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Rab5cP35278 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rab5cP35278 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab5cP35278 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab5cP35278 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab5cP35278 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab5cP35278 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC11.3□□□□□ -0.6
Rab5cP35278 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab5cP35278 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Rab5cP35278 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rab5cP35278 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab5cP35278 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab5cP35278 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC11.3□□□□□ -0.6
Rab5cP35278 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab5cP35278 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Rab5cP35278 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC11.3□□□□□ -0.6
Rab5cP35278 AC164629.5-201ENSMUST00000220387 632 ntBASIC11.3□□□□□ -0.6
Rab5cP35278 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab5cP35278 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Rab5cP35278 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab5cP35278 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab5cP35278 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab5cP35278 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab5cP35278 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab5cP35278 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab5cP35278 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rab5cP35278 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Rab5cP35278 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Rab5cP35278 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab5cP35278 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab5cP35278 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab5cP35278 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rab5cP35278 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab5cP35278 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab5cP35278 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab5cP35278 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.29□□□□□ -0.6
Rab5cP35278 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms