Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 AL079307.3-201ENST00000556114 283 ntBASIC21.03■□□□□ 0.96
RFC4P35249 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC21.03■□□□□ 0.96
RFC4P35249 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC21.03■□□□□ 0.96
RFC4P35249 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC21.03■□□□□ 0.96
RFC4P35249 AL162274.1-201ENST00000617191 1098 ntBASIC21.03■□□□□ 0.96
RFC4P35249 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC21.03■□□□□ 0.96
RFC4P35249 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RFC4P35249 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
RFC4P35249 FRMD8P1-201ENST00000440433 1524 ntBASIC21.03■□□□□ 0.96
RFC4P35249 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RFC4P35249 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC21.03■□□□□ 0.96
RFC4P35249 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
RFC4P35249 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFC4P35249 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RFC4P35249 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC21.02■□□□□ 0.96
RFC4P35249 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFC4P35249 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RFC4P35249 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RFC4P35249 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC21.02■□□□□ 0.96
RFC4P35249 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RFC4P35249 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC21.02■□□□□ 0.96
RFC4P35249 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
RFC4P35249 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFC4P35249 AC004408.2-201ENST00000623613 2777 ntBASIC21.02■□□□□ 0.96
RFC4P35249 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RFC4P35249 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
RFC4P35249 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFC4P35249 SLC25A1P3-201ENST00000395415 828 ntBASIC21.02■□□□□ 0.96
RFC4P35249 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFC4P35249 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC21.02■□□□□ 0.96
RFC4P35249 AC011495.1-201ENST00000498085 584 ntBASIC21.02■□□□□ 0.96
RFC4P35249 AC098859.1-201ENST00000502915 1238 ntBASIC21.02■□□□□ 0.96
RFC4P35249 BANF1P1-201ENST00000553684 263 ntBASIC21.02■□□□□ 0.96
RFC4P35249 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC21.02■□□□□ 0.96
RFC4P35249 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFC4P35249 AL133215.2-201ENST00000609242 977 ntBASIC21.02■□□□□ 0.96
RFC4P35249 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFC4P35249 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC21.02■□□□□ 0.96
RFC4P35249 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFC4P35249 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFC4P35249 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
RFC4P35249 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC21.02■□□□□ 0.95
RFC4P35249 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RFC4P35249 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC21.01■□□□□ 0.95
RFC4P35249 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RFC4P35249 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RFC4P35249 BICD1-207ENST00000551848 1962 ntBASIC21.01■□□□□ 0.95
RFC4P35249 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RFC4P35249 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
RFC4P35249 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RFC4P35249 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RFC4P35249 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RFC4P35249 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
RFC4P35249 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RFC4P35249 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RFC4P35249 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC21.01■□□□□ 0.95
RFC4P35249 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC21.01■□□□□ 0.95
RFC4P35249 RPS2P32-201ENST00000439199 892 ntBASIC21.01■□□□□ 0.95
RFC4P35249 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC21.01■□□□□ 0.95
RFC4P35249 RNA5SP410-201ENST00000516285 106 ntBASIC21.01■□□□□ 0.95
RFC4P35249 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC21.01■□□□□ 0.95
RFC4P35249 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
RFC4P35249 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC21.01■□□□□ 0.95
RFC4P35249 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC21.01■□□□□ 0.95
RFC4P35249 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
RFC4P35249 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
RFC4P35249 AC016396.2-201ENST00000562575 1417 ntBASIC21.01■□□□□ 0.95
RFC4P35249 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RFC4P35249 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RFC4P35249 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
RFC4P35249 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RFC4P35249 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
RFC4P35249 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21■□□□□ 0.95
RFC4P35249 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC21■□□□□ 0.95
RFC4P35249 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC21■□□□□ 0.95
RFC4P35249 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RFC4P35249 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC21■□□□□ 0.95
RFC4P35249 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21■□□□□ 0.95
RFC4P35249 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
RFC4P35249 SPDYE19P-201ENST00000338590 713 ntBASIC21■□□□□ 0.95
RFC4P35249 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC21■□□□□ 0.95
RFC4P35249 MXI1-205ENST00000393134 889 ntTSL 2 BASIC21■□□□□ 0.95
RFC4P35249 OSM-203ENST00000403463 464 ntTSL 3 BASIC21■□□□□ 0.95
RFC4P35249 AL080243.2-201ENST00000418783 582 ntBASIC21■□□□□ 0.95
RFC4P35249 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC21■□□□□ 0.95
RFC4P35249 ACA64.2-201ENST00000459014 129 ntBASIC21■□□□□ 0.95
RFC4P35249 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC21■□□□□ 0.95
RFC4P35249 ZNF890P-202ENST00000530367 1156 ntBASIC21■□□□□ 0.95
RFC4P35249 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC21■□□□□ 0.95
RFC4P35249 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RFC4P35249 CHCHD2P3-201ENST00000603038 451 ntBASIC21■□□□□ 0.95
RFC4P35249 AC008494.3-201ENST00000606615 944 ntBASIC21■□□□□ 0.95
RFC4P35249 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC21■□□□□ 0.95
RFC4P35249 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RFC4P35249 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC21■□□□□ 0.95
RFC4P35249 HTR7P1-202ENST00000624664 4411 ntBASIC21■□□□□ 0.95
RFC4P35249 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC21■□□□□ 0.95
RFC4P35249 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
RFC4P35249 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC21■□□□□ 0.95
RFC4P35249 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms