Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
BdnfP21237 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
BdnfP21237 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BdnfP21237 Gm10175-201ENSMUST00000086013 645 ntBASIC13.36□□□□□ -0.27
BdnfP21237 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
BdnfP21237 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BdnfP21237 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
BdnfP21237 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
BdnfP21237 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
BdnfP21237 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BdnfP21237 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
BdnfP21237 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BdnfP21237 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BdnfP21237 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BdnfP21237 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
BdnfP21237 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
BdnfP21237 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BdnfP21237 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BdnfP21237 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
BdnfP21237 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.35□□□□□ -0.27
BdnfP21237 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.35□□□□□ -0.27
BdnfP21237 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
BdnfP21237 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
BdnfP21237 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
BdnfP21237 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.35□□□□□ -0.27
BdnfP21237 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BdnfP21237 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
BdnfP21237 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BdnfP21237 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
BdnfP21237 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.35□□□□□ -0.27
BdnfP21237 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
BdnfP21237 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
BdnfP21237 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.35□□□□□ -0.27
BdnfP21237 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.35□□□□□ -0.27
BdnfP21237 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.35□□□□□ -0.27
BdnfP21237 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BdnfP21237 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
BdnfP21237 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BdnfP21237 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BdnfP21237 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
BdnfP21237 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BdnfP21237 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
BdnfP21237 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
BdnfP21237 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BdnfP21237 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
BdnfP21237 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BdnfP21237 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
BdnfP21237 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
BdnfP21237 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
BdnfP21237 Gm42706-201ENSMUST00000199733 1910 ntBASIC13.35□□□□□ -0.27
BdnfP21237 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
BdnfP21237 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.35□□□□□ -0.27
BdnfP21237 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BdnfP21237 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BdnfP21237 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
BdnfP21237 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
BdnfP21237 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
BdnfP21237 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
BdnfP21237 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
BdnfP21237 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
BdnfP21237 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
BdnfP21237 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
BdnfP21237 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
BdnfP21237 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.34□□□□□ -0.27
BdnfP21237 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
BdnfP21237 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
BdnfP21237 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
BdnfP21237 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
BdnfP21237 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
BdnfP21237 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
BdnfP21237 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.34□□□□□ -0.27
BdnfP21237 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
BdnfP21237 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.34□□□□□ -0.27
BdnfP21237 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
BdnfP21237 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.34□□□□□ -0.27
BdnfP21237 Gm5264-201ENSMUST00000190584 848 ntBASIC13.34□□□□□ -0.27
BdnfP21237 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
BdnfP21237 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.34□□□□□ -0.27
BdnfP21237 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
BdnfP21237 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
BdnfP21237 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
BdnfP21237 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
BdnfP21237 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.34□□□□□ -0.27
BdnfP21237 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
BdnfP21237 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
BdnfP21237 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
BdnfP21237 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
BdnfP21237 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
BdnfP21237 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
BdnfP21237 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
BdnfP21237 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
BdnfP21237 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
BdnfP21237 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
BdnfP21237 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
BdnfP21237 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
BdnfP21237 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
BdnfP21237 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
BdnfP21237 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.33□□□□□ -0.28
BdnfP21237 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
BdnfP21237 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms