Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC12.11□□□□□ -0.47
UbbP0CG49 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC12.11□□□□□ -0.47
UbbP0CG49 AC164629.2-201ENSMUST00000217916 270 ntBASIC12.11□□□□□ -0.47
UbbP0CG49 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.11□□□□□ -0.47
UbbP0CG49 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UbbP0CG49 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UbbP0CG49 Gm7461-201ENSMUST00000058918 827 ntBASIC12.11□□□□□ -0.47
UbbP0CG49 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC12.11□□□□□ -0.47
UbbP0CG49 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UbbP0CG49 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UbbP0CG49 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
UbbP0CG49 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UbbP0CG49 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UbbP0CG49 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UbbP0CG49 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
UbbP0CG49 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
UbbP0CG49 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
UbbP0CG49 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
UbbP0CG49 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.11□□□□□ -0.47
UbbP0CG49 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UbbP0CG49 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
UbbP0CG49 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
UbbP0CG49 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.11□□□□□ -0.47
UbbP0CG49 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
UbbP0CG49 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
UbbP0CG49 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.1□□□□□ -0.47
UbbP0CG49 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
UbbP0CG49 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
UbbP0CG49 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.1□□□□□ -0.47
UbbP0CG49 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
UbbP0CG49 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.1□□□□□ -0.47
UbbP0CG49 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
UbbP0CG49 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
UbbP0CG49 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
UbbP0CG49 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.1□□□□□ -0.47
UbbP0CG49 Gm25925-201ENSMUST00000158314 306 ntBASIC12.1□□□□□ -0.47
UbbP0CG49 Gm18737-201ENSMUST00000173594 937 ntBASIC12.1□□□□□ -0.47
UbbP0CG49 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC12.1□□□□□ -0.47
UbbP0CG49 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
UbbP0CG49 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
UbbP0CG49 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
UbbP0CG49 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
UbbP0CG49 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
UbbP0CG49 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
UbbP0CG49 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
UbbP0CG49 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
UbbP0CG49 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
UbbP0CG49 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
UbbP0CG49 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.1□□□□□ -0.47
UbbP0CG49 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
UbbP0CG49 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UbbP0CG49 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.09□□□□□ -0.47
UbbP0CG49 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
UbbP0CG49 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
UbbP0CG49 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
UbbP0CG49 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
UbbP0CG49 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UbbP0CG49 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UbbP0CG49 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UbbP0CG49 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
UbbP0CG49 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.09□□□□□ -0.47
UbbP0CG49 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
UbbP0CG49 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
UbbP0CG49 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UbbP0CG49 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
UbbP0CG49 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
UbbP0CG49 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UbbP0CG49 Gm14140-201ENSMUST00000119999 995 ntBASIC12.09□□□□□ -0.47
UbbP0CG49 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
UbbP0CG49 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.09□□□□□ -0.47
UbbP0CG49 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC12.09□□□□□ -0.47
UbbP0CG49 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.09□□□□□ -0.47
UbbP0CG49 Gm10459-201ENSMUST00000202708 1155 ntBASIC12.09□□□□□ -0.47
UbbP0CG49 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC12.09□□□□□ -0.47
UbbP0CG49 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC12.09□□□□□ -0.47
UbbP0CG49 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.09□□□□□ -0.47
UbbP0CG49 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC12.09□□□□□ -0.47
UbbP0CG49 AC159295.1-201ENSMUST00000225326 940 ntBASIC12.09□□□□□ -0.47
UbbP0CG49 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UbbP0CG49 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.09□□□□□ -0.47
UbbP0CG49 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UbbP0CG49 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.09□□□□□ -0.47
UbbP0CG49 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UbbP0CG49 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UbbP0CG49 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UbbP0CG49 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.09□□□□□ -0.47
UbbP0CG49 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UbbP0CG49 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UbbP0CG49 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.09□□□□□ -0.47
UbbP0CG49 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
UbbP0CG49 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UbbP0CG49 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
UbbP0CG49 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
UbbP0CG49 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
UbbP0CG49 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
UbbP0CG49 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.09□□□□□ -0.47
UbbP0CG49 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UbbP0CG49 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
UbbP0CG49 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UbbP0CG49 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms