Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Gm9726-201ENSMUST00000180321 678 ntBASIC12.41□□□□□ -0.42
CcnkO88874 Gm44945-201ENSMUST00000206764 1187 ntBASIC12.41□□□□□ -0.42
CcnkO88874 Gm7229-201ENSMUST00000214719 1007 ntBASIC12.41□□□□□ -0.42
CcnkO88874 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CcnkO88874 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CcnkO88874 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CcnkO88874 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CcnkO88874 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CcnkO88874 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CcnkO88874 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CcnkO88874 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CcnkO88874 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CcnkO88874 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CcnkO88874 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CcnkO88874 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CcnkO88874 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CcnkO88874 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CcnkO88874 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CcnkO88874 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CcnkO88874 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CcnkO88874 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CcnkO88874 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CcnkO88874 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CcnkO88874 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.4□□□□□ -0.42
CcnkO88874 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
CcnkO88874 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CcnkO88874 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CcnkO88874 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CcnkO88874 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CcnkO88874 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.4□□□□□ -0.42
CcnkO88874 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.4□□□□□ -0.42
CcnkO88874 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CcnkO88874 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
CcnkO88874 Gm17968-201ENSMUST00000194902 784 ntBASIC12.4□□□□□ -0.42
CcnkO88874 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.4□□□□□ -0.42
CcnkO88874 Gm45683-201ENSMUST00000210825 1247 ntBASIC12.4□□□□□ -0.42
CcnkO88874 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.4□□□□□ -0.42
CcnkO88874 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CcnkO88874 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CcnkO88874 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CcnkO88874 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CcnkO88874 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
CcnkO88874 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CcnkO88874 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CcnkO88874 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CcnkO88874 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CcnkO88874 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CcnkO88874 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
CcnkO88874 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CcnkO88874 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
CcnkO88874 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.4□□□□□ -0.42
CcnkO88874 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CcnkO88874 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CcnkO88874 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CcnkO88874 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CcnkO88874 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CcnkO88874 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CcnkO88874 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CcnkO88874 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CcnkO88874 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
CcnkO88874 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.4□□□□□ -0.43
CcnkO88874 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.4□□□□□ -0.43
CcnkO88874 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.4□□□□□ -0.43
CcnkO88874 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
CcnkO88874 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CcnkO88874 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC12.39□□□□□ -0.43
CcnkO88874 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CcnkO88874 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CcnkO88874 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
CcnkO88874 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
CcnkO88874 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CcnkO88874 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CcnkO88874 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.39□□□□□ -0.43
CcnkO88874 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CcnkO88874 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CcnkO88874 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CcnkO88874 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CcnkO88874 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CcnkO88874 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CcnkO88874 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.39□□□□□ -0.43
CcnkO88874 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
CcnkO88874 Gm45747-201ENSMUST00000212203 999 ntBASIC12.39□□□□□ -0.43
CcnkO88874 AC174742.1-201ENSMUST00000218272 304 ntBASIC12.39□□□□□ -0.43
CcnkO88874 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CcnkO88874 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CcnkO88874 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
CcnkO88874 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CcnkO88874 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
CcnkO88874 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.39□□□□□ -0.43
CcnkO88874 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CcnkO88874 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
CcnkO88874 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CcnkO88874 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CcnkO88874 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CcnkO88874 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CcnkO88874 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.39□□□□□ -0.43
CcnkO88874 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CcnkO88874 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.39□□□□□ -0.43
CcnkO88874 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
CcnkO88874 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms