Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Gm18054-201ENSMUST00000207539 555 ntBASIC15.25■□□□□ 0.03
Trdmt1O55055 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Trdmt1O55055 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trdmt1O55055 Gm7399-201ENSMUST00000032395 858 ntBASIC15.25■□□□□ 0.03
Trdmt1O55055 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trdmt1O55055 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trdmt1O55055 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trdmt1O55055 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trdmt1O55055 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.25■□□□□ 0.03
Trdmt1O55055 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trdmt1O55055 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trdmt1O55055 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trdmt1O55055 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trdmt1O55055 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trdmt1O55055 Gm38102-201ENSMUST00000192791 1935 ntBASIC15.25■□□□□ 0.03
Trdmt1O55055 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trdmt1O55055 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trdmt1O55055 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trdmt1O55055 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trdmt1O55055 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trdmt1O55055 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.24■□□□□ 0.03
Trdmt1O55055 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Trdmt1O55055 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trdmt1O55055 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trdmt1O55055 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trdmt1O55055 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trdmt1O55055 Zkscan14-203ENSMUST00000198959 2243 ntBASIC15.24■□□□□ 0.03
Trdmt1O55055 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trdmt1O55055 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trdmt1O55055 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trdmt1O55055 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trdmt1O55055 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trdmt1O55055 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trdmt1O55055 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trdmt1O55055 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trdmt1O55055 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trdmt1O55055 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC15.24■□□□□ 0.03
Trdmt1O55055 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trdmt1O55055 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trdmt1O55055 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC15.24■□□□□ 0.03
Trdmt1O55055 Gm43179-201ENSMUST00000198797 275 ntBASIC15.24■□□□□ 0.03
Trdmt1O55055 Gm17870-201ENSMUST00000219489 1174 ntBASIC15.24■□□□□ 0.03
Trdmt1O55055 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trdmt1O55055 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trdmt1O55055 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trdmt1O55055 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.24■□□□□ 0.03
Trdmt1O55055 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trdmt1O55055 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trdmt1O55055 Gm18222-201ENSMUST00000202416 1387 ntBASIC15.24■□□□□ 0.03
Trdmt1O55055 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trdmt1O55055 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trdmt1O55055 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trdmt1O55055 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trdmt1O55055 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trdmt1O55055 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trdmt1O55055 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trdmt1O55055 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trdmt1O55055 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trdmt1O55055 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trdmt1O55055 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trdmt1O55055 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trdmt1O55055 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trdmt1O55055 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trdmt1O55055 Gm12203-201ENSMUST00000118235 598 ntBASIC15.23■□□□□ 0.03
Trdmt1O55055 Gm12209-201ENSMUST00000120089 596 ntBASIC15.23■□□□□ 0.03
Trdmt1O55055 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC15.23■□□□□ 0.03
Trdmt1O55055 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC15.23■□□□□ 0.03
Trdmt1O55055 Gm29608-201ENSMUST00000190444 463 ntBASIC15.23■□□□□ 0.03
Trdmt1O55055 Gm38144-201ENSMUST00000192790 465 ntBASIC15.23■□□□□ 0.03
Trdmt1O55055 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trdmt1O55055 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trdmt1O55055 Gm18934-201ENSMUST00000216671 1044 ntBASIC15.23■□□□□ 0.03
Trdmt1O55055 AC131997.1-201ENSMUST00000228611 1229 ntBASIC15.23■□□□□ 0.03
Trdmt1O55055 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trdmt1O55055 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trdmt1O55055 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trdmt1O55055 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trdmt1O55055 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trdmt1O55055 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC15.23■□□□□ 0.03
Trdmt1O55055 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trdmt1O55055 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trdmt1O55055 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trdmt1O55055 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trdmt1O55055 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trdmt1O55055 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trdmt1O55055 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trdmt1O55055 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Trdmt1O55055 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC15.22■□□□□ 0.03
Trdmt1O55055 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trdmt1O55055 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trdmt1O55055 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trdmt1O55055 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trdmt1O55055 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trdmt1O55055 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trdmt1O55055 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trdmt1O55055 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trdmt1O55055 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trdmt1O55055 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trdmt1O55055 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC15.22■□□□□ 0.03
Trdmt1O55055 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms