Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Efnb3O35393 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Efnb3O35393 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Efnb3O35393 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Efnb3O35393 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Efnb3O35393 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Efnb3O35393 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC11.01□□□□□ -0.65
Efnb3O35393 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC11.01□□□□□ -0.65
Efnb3O35393 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Efnb3O35393 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC11.01□□□□□ -0.65
Efnb3O35393 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Efnb3O35393 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Efnb3O35393 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Efnb3O35393 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC11.01□□□□□ -0.65
Efnb3O35393 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC11.01□□□□□ -0.65
Efnb3O35393 Gm5364-201ENSMUST00000216789 889 ntBASIC11.01□□□□□ -0.65
Efnb3O35393 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Efnb3O35393 AC123645.1-201ENSMUST00000228469 605 ntBASIC11.01□□□□□ -0.65
Efnb3O35393 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Efnb3O35393 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Efnb3O35393 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Efnb3O35393 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC11.01□□□□□ -0.65
Efnb3O35393 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.01□□□□□ -0.65
Efnb3O35393 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Efnb3O35393 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Efnb3O35393 Gm9347-201ENSMUST00000211473 1607 ntBASIC11.01□□□□□ -0.65
Efnb3O35393 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Efnb3O35393 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Efnb3O35393 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Efnb3O35393 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Efnb3O35393 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.01□□□□□ -0.65
Efnb3O35393 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Efnb3O35393 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Efnb3O35393 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
Efnb3O35393 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Efnb3O35393 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Efnb3O35393 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC11□□□□□ -0.65
Efnb3O35393 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Efnb3O35393 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Efnb3O35393 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Efnb3O35393 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Efnb3O35393 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Efnb3O35393 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11□□□□□ -0.65
Efnb3O35393 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Efnb3O35393 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Efnb3O35393 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11□□□□□ -0.65
Efnb3O35393 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Efnb3O35393 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Efnb3O35393 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Efnb3O35393 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Efnb3O35393 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Efnb3O35393 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Efnb3O35393 Gm9924-202ENSMUST00000192760 2311 ntBASIC11□□□□□ -0.65
Efnb3O35393 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Efnb3O35393 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Efnb3O35393 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11□□□□□ -0.65
Efnb3O35393 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Efnb3O35393 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Efnb3O35393 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC11□□□□□ -0.65
Efnb3O35393 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Efnb3O35393 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11□□□□□ -0.65
Efnb3O35393 Gm9727-201ENSMUST00000161387 555 ntBASIC11□□□□□ -0.65
Efnb3O35393 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC11□□□□□ -0.65
Efnb3O35393 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC11□□□□□ -0.65
Efnb3O35393 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC11□□□□□ -0.65
Efnb3O35393 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC11□□□□□ -0.65
Efnb3O35393 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC11□□□□□ -0.65
Efnb3O35393 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC11□□□□□ -0.65
Efnb3O35393 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Efnb3O35393 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Efnb3O35393 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC11□□□□□ -0.65
Efnb3O35393 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC11□□□□□ -0.65
Efnb3O35393 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Efnb3O35393 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
Efnb3O35393 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Efnb3O35393 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Efnb3O35393 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Efnb3O35393 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Efnb3O35393 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Efnb3O35393 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
Efnb3O35393 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Efnb3O35393 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11□□□□□ -0.65
Efnb3O35393 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Efnb3O35393 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Efnb3O35393 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Efnb3O35393 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Efnb3O35393 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Efnb3O35393 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Efnb3O35393 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Efnb3O35393 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Efnb3O35393 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC10.99□□□□□ -0.65
Efnb3O35393 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Efnb3O35393 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Efnb3O35393 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Efnb3O35393 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Efnb3O35393 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Efnb3O35393 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Efnb3O35393 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Efnb3O35393 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Efnb3O35393 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms