Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc149F6V035 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc149F6V035 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.1□□□□□ -0.15
Ccdc149F6V035 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc149F6V035 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc149F6V035 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc149F6V035 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.1□□□□□ -0.15
Ccdc149F6V035 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc149F6V035 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc149F6V035 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc149F6V035 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.1□□□□□ -0.15
Ccdc149F6V035 Gm12485-201ENSMUST00000119641 291 ntBASIC14.1□□□□□ -0.15
Ccdc149F6V035 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.1□□□□□ -0.15
Ccdc149F6V035 Mir1894-201ENSMUST00000122802 81 ntBASIC14.1□□□□□ -0.15
Ccdc149F6V035 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc149F6V035 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc149F6V035 Gm15429-201ENSMUST00000151268 798 ntBASIC14.1□□□□□ -0.15
Ccdc149F6V035 Gm26464-201ENSMUST00000157094 305 ntBASIC14.1□□□□□ -0.15
Ccdc149F6V035 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.1□□□□□ -0.15
Ccdc149F6V035 Gm6244-201ENSMUST00000178732 841 ntBASIC14.1□□□□□ -0.15
Ccdc149F6V035 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.1□□□□□ -0.15
Ccdc149F6V035 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.1□□□□□ -0.15
Ccdc149F6V035 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc149F6V035 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc149F6V035 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc149F6V035 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc149F6V035 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc149F6V035 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc149F6V035 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc149F6V035 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc149F6V035 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc149F6V035 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc149F6V035 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc149F6V035 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc149F6V035 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc149F6V035 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc149F6V035 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc149F6V035 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc149F6V035 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc149F6V035 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc149F6V035 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc149F6V035 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc149F6V035 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc149F6V035 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.09□□□□□ -0.15
Ccdc149F6V035 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc149F6V035 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc149F6V035 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc149F6V035 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc149F6V035 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc149F6V035 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc149F6V035 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc149F6V035 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc149F6V035 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc149F6V035 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc149F6V035 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Ccdc149F6V035 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc149F6V035 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Ccdc149F6V035 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc149F6V035 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.09□□□□□ -0.15
Ccdc149F6V035 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.09□□□□□ -0.15
Ccdc149F6V035 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc149F6V035 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc149F6V035 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc149F6V035 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc149F6V035 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc149F6V035 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc149F6V035 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.09□□□□□ -0.15
Ccdc149F6V035 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc149F6V035 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc149F6V035 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc149F6V035 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc149F6V035 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc149F6V035 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc149F6V035 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.08□□□□□ -0.15
Ccdc149F6V035 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc149F6V035 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc149F6V035 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.08□□□□□ -0.15
Ccdc149F6V035 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc149F6V035 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc149F6V035 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc149F6V035 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc149F6V035 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ccdc149F6V035 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc149F6V035 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc149F6V035 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc149F6V035 Gm15371-201ENSMUST00000117057 784 ntBASIC14.08□□□□□ -0.16
Ccdc149F6V035 Gm15376-201ENSMUST00000122258 783 ntBASIC14.08□□□□□ -0.16
Ccdc149F6V035 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC14.08□□□□□ -0.16
Ccdc149F6V035 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.08□□□□□ -0.16
Ccdc149F6V035 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc149F6V035 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Ccdc149F6V035 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc149F6V035 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc149F6V035 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc149F6V035 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.08□□□□□ -0.16
Ccdc149F6V035 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.08□□□□□ -0.16
Ccdc149F6V035 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ccdc149F6V035 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc149F6V035 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc149F6V035 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms