Protein–RNA interactions for Protein: E9PZM4

Chd2, Chromodomain-helicase-DNA-binding protein 2, mousemouse

Known RBP Predictions only

Length 1,827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd2E9PZM4 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chd2E9PZM4 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC18.64■□□□□ 0.57
Chd2E9PZM4 Gm13875-201ENSMUST00000120162 282 ntBASIC18.64■□□□□ 0.57
Chd2E9PZM4 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC18.64■□□□□ 0.57
Chd2E9PZM4 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Chd2E9PZM4 Gm7467-201ENSMUST00000185173 652 ntBASIC18.64■□□□□ 0.57
Chd2E9PZM4 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Chd2E9PZM4 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chd2E9PZM4 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC18.64■□□□□ 0.57
Chd2E9PZM4 Gm8228-201ENSMUST00000189949 2192 ntBASIC18.64■□□□□ 0.57
Chd2E9PZM4 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Chd2E9PZM4 Gm5884-201ENSMUST00000036712 1479 ntBASIC18.64■□□□□ 0.57
Chd2E9PZM4 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Chd2E9PZM4 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chd2E9PZM4 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Chd2E9PZM4 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chd2E9PZM4 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chd2E9PZM4 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chd2E9PZM4 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Chd2E9PZM4 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chd2E9PZM4 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chd2E9PZM4 Gm45224-201ENSMUST00000208203 414 ntBASIC18.63■□□□□ 0.57
Chd2E9PZM4 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chd2E9PZM4 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chd2E9PZM4 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chd2E9PZM4 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Chd2E9PZM4 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chd2E9PZM4 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC18.63■□□□□ 0.57
Chd2E9PZM4 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chd2E9PZM4 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chd2E9PZM4 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chd2E9PZM4 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chd2E9PZM4 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Chd2E9PZM4 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC18.63■□□□□ 0.57
Chd2E9PZM4 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chd2E9PZM4 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chd2E9PZM4 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chd2E9PZM4 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chd2E9PZM4 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Chd2E9PZM4 Gm2546-201ENSMUST00000182630 991 ntBASIC18.63■□□□□ 0.57
Chd2E9PZM4 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC18.63■□□□□ 0.57
Chd2E9PZM4 Gm3096-201ENSMUST00000185770 364 ntBASIC18.63■□□□□ 0.57
Chd2E9PZM4 Gm44405-201ENSMUST00000198952 126 ntBASIC18.63■□□□□ 0.57
Chd2E9PZM4 Gm43378-201ENSMUST00000199336 582 ntBASIC18.63■□□□□ 0.57
Chd2E9PZM4 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC18.63■□□□□ 0.57
Chd2E9PZM4 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chd2E9PZM4 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
Chd2E9PZM4 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chd2E9PZM4 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chd2E9PZM4 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chd2E9PZM4 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Chd2E9PZM4 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chd2E9PZM4 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Chd2E9PZM4 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
Chd2E9PZM4 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chd2E9PZM4 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chd2E9PZM4 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Chd2E9PZM4 Gm8908-201ENSMUST00000121633 1024 ntBASIC18.62■□□□□ 0.57
Chd2E9PZM4 n-R5s14-201ENSMUST00000122688 107 ntBASIC18.62■□□□□ 0.57
Chd2E9PZM4 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC18.62■□□□□ 0.57
Chd2E9PZM4 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC18.62■□□□□ 0.57
Chd2E9PZM4 Gm8856-201ENSMUST00000185254 1144 ntBASIC18.62■□□□□ 0.57
Chd2E9PZM4 Gm10109-202ENSMUST00000206890 1211 ntBASIC18.62■□□□□ 0.57
Chd2E9PZM4 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chd2E9PZM4 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Chd2E9PZM4 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chd2E9PZM4 Gm44775-201ENSMUST00000207266 1456 ntBASIC18.62■□□□□ 0.57
Chd2E9PZM4 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chd2E9PZM4 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC18.62■□□□□ 0.57
Chd2E9PZM4 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chd2E9PZM4 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chd2E9PZM4 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chd2E9PZM4 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chd2E9PZM4 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chd2E9PZM4 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Chd2E9PZM4 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Chd2E9PZM4 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC18.61■□□□□ 0.57
Chd2E9PZM4 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chd2E9PZM4 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Chd2E9PZM4 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chd2E9PZM4 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC18.61■□□□□ 0.57
Chd2E9PZM4 Mir1943-201ENSMUST00000158276 73 ntBASIC18.61■□□□□ 0.57
Chd2E9PZM4 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC18.61■□□□□ 0.57
Chd2E9PZM4 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Chd2E9PZM4 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC18.61■□□□□ 0.57
Chd2E9PZM4 Gm45770-201ENSMUST00000212105 616 ntBASIC18.61■□□□□ 0.57
Chd2E9PZM4 AC166051.1-201ENSMUST00000214313 210 ntBASIC18.61■□□□□ 0.57
Chd2E9PZM4 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chd2E9PZM4 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chd2E9PZM4 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Chd2E9PZM4 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Chd2E9PZM4 Gm9856-201ENSMUST00000217077 2578 ntBASIC18.61■□□□□ 0.57
Chd2E9PZM4 Nupl1-207ENSMUST00000225311 2475 ntBASIC18.61■□□□□ 0.57
Chd2E9PZM4 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Chd2E9PZM4 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Chd2E9PZM4 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chd2E9PZM4 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC18.6■□□□□ 0.57
Chd2E9PZM4 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
Chd2E9PZM4 Gm15547-201ENSMUST00000122152 333 ntBASIC18.6■□□□□ 0.57
Chd2E9PZM4 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms