Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a3E9PWQ3 Gm12266-201ENSMUST00000120311 962 ntBASIC13.57□□□□□ -0.24
Col6a3E9PWQ3 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Col6a3E9PWQ3 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a3E9PWQ3 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a3E9PWQ3 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a3E9PWQ3 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a3E9PWQ3 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a3E9PWQ3 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a3E9PWQ3 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a3E9PWQ3 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a3E9PWQ3 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a3E9PWQ3 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a3E9PWQ3 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a3E9PWQ3 Gm2231-201ENSMUST00000125661 612 ntBASIC13.56□□□□□ -0.24
Col6a3E9PWQ3 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.56□□□□□ -0.24
Col6a3E9PWQ3 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC13.56□□□□□ -0.24
Col6a3E9PWQ3 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC13.56□□□□□ -0.24
Col6a3E9PWQ3 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a3E9PWQ3 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a3E9PWQ3 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a3E9PWQ3 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.56□□□□□ -0.24
Col6a3E9PWQ3 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a3E9PWQ3 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.56□□□□□ -0.24
Col6a3E9PWQ3 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a3E9PWQ3 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a3E9PWQ3 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Col6a3E9PWQ3 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a3E9PWQ3 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC13.56□□□□□ -0.24
Col6a3E9PWQ3 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Col6a3E9PWQ3 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC13.56□□□□□ -0.24
Col6a3E9PWQ3 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC13.56□□□□□ -0.24
Col6a3E9PWQ3 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a3E9PWQ3 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a3E9PWQ3 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Col6a3E9PWQ3 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a3E9PWQ3 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a3E9PWQ3 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a3E9PWQ3 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.56□□□□□ -0.24
Col6a3E9PWQ3 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a3E9PWQ3 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a3E9PWQ3 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a3E9PWQ3 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a3E9PWQ3 Gm8738-201ENSMUST00000172606 329 ntBASIC13.56□□□□□ -0.24
Col6a3E9PWQ3 Gm3793-201ENSMUST00000204973 672 ntBASIC13.56□□□□□ -0.24
Col6a3E9PWQ3 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Col6a3E9PWQ3 Gm8913-201ENSMUST00000209491 641 ntBASIC13.56□□□□□ -0.24
Col6a3E9PWQ3 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a3E9PWQ3 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a3E9PWQ3 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a3E9PWQ3 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a3E9PWQ3 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a3E9PWQ3 Gm11637-201ENSMUST00000120601 592 ntBASIC13.55□□□□□ -0.24
Col6a3E9PWQ3 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a3E9PWQ3 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a3E9PWQ3 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a3E9PWQ3 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.55□□□□□ -0.24
Col6a3E9PWQ3 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a3E9PWQ3 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC13.55□□□□□ -0.24
Col6a3E9PWQ3 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a3E9PWQ3 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a3E9PWQ3 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a3E9PWQ3 Gm14150-201ENSMUST00000122404 1354 ntBASIC13.55□□□□□ -0.24
Col6a3E9PWQ3 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Col6a3E9PWQ3 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC13.55□□□□□ -0.24
Col6a3E9PWQ3 Gm44953-201ENSMUST00000208745 1286 ntBASIC13.55□□□□□ -0.24
Col6a3E9PWQ3 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.55□□□□□ -0.24
Col6a3E9PWQ3 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC13.55□□□□□ -0.24
Col6a3E9PWQ3 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a3E9PWQ3 Gm25201-201ENSMUST00000083093 170 ntBASIC13.55□□□□□ -0.24
Col6a3E9PWQ3 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a3E9PWQ3 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a3E9PWQ3 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a3E9PWQ3 Gm13035-201ENSMUST00000117496 342 ntBASIC13.54□□□□□ -0.24
Col6a3E9PWQ3 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC13.54□□□□□ -0.24
Col6a3E9PWQ3 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC13.54□□□□□ -0.24
Col6a3E9PWQ3 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.54□□□□□ -0.24
Col6a3E9PWQ3 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC13.54□□□□□ -0.24
Col6a3E9PWQ3 CT485607.1-201ENSMUST00000216100 85 ntBASIC13.54□□□□□ -0.24
Col6a3E9PWQ3 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a3E9PWQ3 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a3E9PWQ3 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.54□□□□□ -0.24
Col6a3E9PWQ3 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a3E9PWQ3 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a3E9PWQ3 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a3E9PWQ3 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a3E9PWQ3 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a3E9PWQ3 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Col6a3E9PWQ3 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a3E9PWQ3 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a3E9PWQ3 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.54□□□□□ -0.24
Col6a3E9PWQ3 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.54□□□□□ -0.24
Col6a3E9PWQ3 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a3E9PWQ3 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a3E9PWQ3 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a3E9PWQ3 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a3E9PWQ3 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a3E9PWQ3 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a3E9PWQ3 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a3E9PWQ3 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms