Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Gm6316-201ENSMUST00000082064 1020 ntBASIC11.26□□□□□ -0.61
Nkx6-2D3Z4R4 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx6-2D3Z4R4 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx6-2D3Z4R4 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Nkx6-2D3Z4R4 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx6-2D3Z4R4 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx6-2D3Z4R4 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx6-2D3Z4R4 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx6-2D3Z4R4 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx6-2D3Z4R4 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx6-2D3Z4R4 Gm29361-201ENSMUST00000183323 2000 ntBASIC11.26□□□□□ -0.61
Nkx6-2D3Z4R4 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Nkx6-2D3Z4R4 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx6-2D3Z4R4 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx6-2D3Z4R4 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.26□□□□□ -0.61
Nkx6-2D3Z4R4 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx6-2D3Z4R4 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx6-2D3Z4R4 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.26□□□□□ -0.61
Nkx6-2D3Z4R4 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx6-2D3Z4R4 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-2D3Z4R4 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-2D3Z4R4 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Nkx6-2D3Z4R4 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-2D3Z4R4 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-2D3Z4R4 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-2D3Z4R4 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-2D3Z4R4 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-2D3Z4R4 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
Nkx6-2D3Z4R4 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-2D3Z4R4 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-2D3Z4R4 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC11.25□□□□□ -0.61
Nkx6-2D3Z4R4 Gm27011-201ENSMUST00000182352 972 ntBASIC11.25□□□□□ -0.61
Nkx6-2D3Z4R4 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC11.25□□□□□ -0.61
Nkx6-2D3Z4R4 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC11.25□□□□□ -0.61
Nkx6-2D3Z4R4 Gm9172-201ENSMUST00000212092 954 ntBASIC11.25□□□□□ -0.61
Nkx6-2D3Z4R4 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-2D3Z4R4 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-2D3Z4R4 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-2D3Z4R4 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-2D3Z4R4 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Nkx6-2D3Z4R4 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-2D3Z4R4 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-2D3Z4R4 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-2D3Z4R4 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-2D3Z4R4 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-2D3Z4R4 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-2D3Z4R4 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Nkx6-2D3Z4R4 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-2D3Z4R4 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Nkx6-2D3Z4R4 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-2D3Z4R4 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-2D3Z4R4 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-2D3Z4R4 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-2D3Z4R4 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-2D3Z4R4 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-2D3Z4R4 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-2D3Z4R4 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Nkx6-2D3Z4R4 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx6-2D3Z4R4 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx6-2D3Z4R4 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Nkx6-2D3Z4R4 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx6-2D3Z4R4 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx6-2D3Z4R4 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx6-2D3Z4R4 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx6-2D3Z4R4 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx6-2D3Z4R4 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx6-2D3Z4R4 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC11.24□□□□□ -0.61
Nkx6-2D3Z4R4 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx6-2D3Z4R4 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx6-2D3Z4R4 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx6-2D3Z4R4 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx6-2D3Z4R4 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx6-2D3Z4R4 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx6-2D3Z4R4 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Nkx6-2D3Z4R4 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx6-2D3Z4R4 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx6-2D3Z4R4 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx6-2D3Z4R4 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx6-2D3Z4R4 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC11.24□□□□□ -0.61
Nkx6-2D3Z4R4 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.24□□□□□ -0.61
Nkx6-2D3Z4R4 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Nkx6-2D3Z4R4 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx6-2D3Z4R4 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx6-2D3Z4R4 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx6-2D3Z4R4 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Nkx6-2D3Z4R4 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC11.24□□□□□ -0.61
Nkx6-2D3Z4R4 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx6-2D3Z4R4 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx6-2D3Z4R4 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx6-2D3Z4R4 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC11.24□□□□□ -0.61
Nkx6-2D3Z4R4 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.23□□□□□ -0.61
Nkx6-2D3Z4R4 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx6-2D3Z4R4 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx6-2D3Z4R4 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx6-2D3Z4R4 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.23□□□□□ -0.61
Nkx6-2D3Z4R4 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx6-2D3Z4R4 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx6-2D3Z4R4 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
Nkx6-2D3Z4R4 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
Nkx6-2D3Z4R4 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms