Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC11.14□□□□□ -0.63
Chd6A3KFM7 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Chd6A3KFM7 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Chd6A3KFM7 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Chd6A3KFM7 Gm6630-201ENSMUST00000119199 454 ntBASIC11.14□□□□□ -0.63
Chd6A3KFM7 Gm12969-201ENSMUST00000120199 1004 ntBASIC11.14□□□□□ -0.63
Chd6A3KFM7 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Chd6A3KFM7 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Chd6A3KFM7 Gm25604-201ENSMUST00000158359 133 ntBASIC11.14□□□□□ -0.63
Chd6A3KFM7 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd6A3KFM7 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.14□□□□□ -0.63
Chd6A3KFM7 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd6A3KFM7 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd6A3KFM7 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Chd6A3KFM7 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd6A3KFM7 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC11.14□□□□□ -0.63
Chd6A3KFM7 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd6A3KFM7 Gm42632-201ENSMUST00000201707 2411 ntBASIC11.14□□□□□ -0.63
Chd6A3KFM7 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd6A3KFM7 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd6A3KFM7 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Chd6A3KFM7 Gm15957-201ENSMUST00000118893 974 ntBASIC11.14□□□□□ -0.63
Chd6A3KFM7 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC11.14□□□□□ -0.63
Chd6A3KFM7 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd6A3KFM7 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.14□□□□□ -0.63
Chd6A3KFM7 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.14□□□□□ -0.63
Chd6A3KFM7 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.14□□□□□ -0.63
Chd6A3KFM7 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd6A3KFM7 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC11.14□□□□□ -0.63
Chd6A3KFM7 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Chd6A3KFM7 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd6A3KFM7 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd6A3KFM7 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Chd6A3KFM7 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chd6A3KFM7 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Chd6A3KFM7 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chd6A3KFM7 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chd6A3KFM7 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Chd6A3KFM7 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chd6A3KFM7 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chd6A3KFM7 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chd6A3KFM7 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC11.13□□□□□ -0.63
Chd6A3KFM7 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Chd6A3KFM7 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC11.13□□□□□ -0.63
Chd6A3KFM7 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC11.13□□□□□ -0.63
Chd6A3KFM7 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chd6A3KFM7 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Chd6A3KFM7 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chd6A3KFM7 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chd6A3KFM7 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Chd6A3KFM7 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chd6A3KFM7 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Chd6A3KFM7 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chd6A3KFM7 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chd6A3KFM7 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chd6A3KFM7 Gm42471-201ENSMUST00000201457 1865 ntBASIC11.13□□□□□ -0.63
Chd6A3KFM7 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.13□□□□□ -0.63
Chd6A3KFM7 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Chd6A3KFM7 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chd6A3KFM7 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.13□□□□□ -0.63
Chd6A3KFM7 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Chd6A3KFM7 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chd6A3KFM7 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chd6A3KFM7 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chd6A3KFM7 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chd6A3KFM7 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chd6A3KFM7 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Chd6A3KFM7 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Chd6A3KFM7 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Chd6A3KFM7 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC11.13□□□□□ -0.63
Chd6A3KFM7 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC11.13□□□□□ -0.63
Chd6A3KFM7 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chd6A3KFM7 Gm8885-201ENSMUST00000189382 598 ntBASIC11.13□□□□□ -0.63
Chd6A3KFM7 AC135469.1-201ENSMUST00000225984 772 ntBASIC11.13□□□□□ -0.63
Chd6A3KFM7 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chd6A3KFM7 Mir483-201ENSMUST00000093631 73 ntBASIC11.13□□□□□ -0.63
Chd6A3KFM7 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chd6A3KFM7 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Chd6A3KFM7 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chd6A3KFM7 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chd6A3KFM7 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chd6A3KFM7 Gm14780-201ENSMUST00000118387 2737 ntBASIC11.12□□□□□ -0.63
Chd6A3KFM7 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC11.12□□□□□ -0.63
Chd6A3KFM7 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chd6A3KFM7 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Chd6A3KFM7 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Chd6A3KFM7 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Chd6A3KFM7 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC11.12□□□□□ -0.63
Chd6A3KFM7 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Chd6A3KFM7 Gm4862-201ENSMUST00000170405 438 ntBASIC11.12□□□□□ -0.63
Chd6A3KFM7 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Chd6A3KFM7 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.12□□□□□ -0.63
Chd6A3KFM7 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chd6A3KFM7 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chd6A3KFM7 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Chd6A3KFM7 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Chd6A3KFM7 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chd6A3KFM7 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chd6A3KFM7 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chd6A3KFM7 Efs-202ENSMUST00000227037 2540 ntBASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms