Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 AC149588.3-201ENSMUST00000227515 150 ntBASIC11.41□□□□□ -0.58
Trav18A0A075B656 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Trav18A0A075B656 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav18A0A075B656 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav18A0A075B656 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav18A0A075B656 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav18A0A075B656 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC11.41□□□□□ -0.58
Trav18A0A075B656 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav18A0A075B656 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.41□□□□□ -0.58
Trav18A0A075B656 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav18A0A075B656 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Trav18A0A075B656 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav18A0A075B656 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav18A0A075B656 Nudt18-203ENSMUST00000228768 1578 ntBASIC11.41□□□□□ -0.58
Trav18A0A075B656 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav18A0A075B656 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav18A0A075B656 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav18A0A075B656 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav18A0A075B656 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trav18A0A075B656 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trav18A0A075B656 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Trav18A0A075B656 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav18A0A075B656 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
Trav18A0A075B656 Grk6-205ENSMUST00000224653 2976 ntBASIC11.4□□□□□ -0.58
Trav18A0A075B656 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav18A0A075B656 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Trav18A0A075B656 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav18A0A075B656 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav18A0A075B656 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav18A0A075B656 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav18A0A075B656 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav18A0A075B656 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav18A0A075B656 Gm4913-201ENSMUST00000117075 1290 ntBASIC11.4□□□□□ -0.58
Trav18A0A075B656 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav18A0A075B656 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav18A0A075B656 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav18A0A075B656 Gm2445-201ENSMUST00000182798 989 ntBASIC11.4□□□□□ -0.58
Trav18A0A075B656 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.4□□□□□ -0.58
Trav18A0A075B656 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC11.4□□□□□ -0.58
Trav18A0A075B656 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav18A0A075B656 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav18A0A075B656 CT030704.2-201ENSMUST00000228887 494 ntBASIC11.4□□□□□ -0.58
Trav18A0A075B656 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav18A0A075B656 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav18A0A075B656 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Trav18A0A075B656 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav18A0A075B656 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav18A0A075B656 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav18A0A075B656 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav18A0A075B656 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav18A0A075B656 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
Trav18A0A075B656 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav18A0A075B656 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.4□□□□□ -0.58
Trav18A0A075B656 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav18A0A075B656 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav18A0A075B656 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav18A0A075B656 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Trav18A0A075B656 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav18A0A075B656 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav18A0A075B656 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Trav18A0A075B656 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav18A0A075B656 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.4□□□□□ -0.59
Trav18A0A075B656 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav18A0A075B656 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav18A0A075B656 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav18A0A075B656 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav18A0A075B656 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav18A0A075B656 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav18A0A075B656 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav18A0A075B656 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav18A0A075B656 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav18A0A075B656 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav18A0A075B656 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav18A0A075B656 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav18A0A075B656 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.39□□□□□ -0.59
Trav18A0A075B656 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav18A0A075B656 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Trav18A0A075B656 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav18A0A075B656 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav18A0A075B656 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC11.39□□□□□ -0.59
Trav18A0A075B656 AA543401-201ENSMUST00000164248 1269 ntBASIC11.39□□□□□ -0.59
Trav18A0A075B656 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav18A0A075B656 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav18A0A075B656 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC11.39□□□□□ -0.59
Trav18A0A075B656 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.39□□□□□ -0.59
Trav18A0A075B656 Ighv8-14-201ENSMUST00000196781 358 ntBASIC11.39□□□□□ -0.59
Trav18A0A075B656 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC11.39□□□□□ -0.59
Trav18A0A075B656 Gm18244-201ENSMUST00000219747 1566 ntBASIC11.39□□□□□ -0.59
Trav18A0A075B656 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav18A0A075B656 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav18A0A075B656 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Trav18A0A075B656 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav18A0A075B656 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav18A0A075B656 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.39□□□□□ -0.59
Trav18A0A075B656 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav18A0A075B656 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trav18A0A075B656 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.39□□□□□ -0.59
Trav18A0A075B656 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav18A0A075B656 BC001981-202ENSMUST00000191393 1545 ntBASIC11.39□□□□□ -0.59
Trav18A0A075B656 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms