Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav8-1A0A075B641 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Trav8-1A0A075B641 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav8-1A0A075B641 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav8-1A0A075B641 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Trav8-1A0A075B641 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav8-1A0A075B641 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav8-1A0A075B641 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav8-1A0A075B641 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav8-1A0A075B641 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav8-1A0A075B641 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav8-1A0A075B641 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Trav8-1A0A075B641 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Trav8-1A0A075B641 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Trav8-1A0A075B641 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav8-1A0A075B641 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC9.96□□□□□ -0.82
Trav8-1A0A075B641 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC9.96□□□□□ -0.82
Trav8-1A0A075B641 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav8-1A0A075B641 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trav8-1A0A075B641 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Trav8-1A0A075B641 Gm8584-201ENSMUST00000171982 758 ntBASIC9.96□□□□□ -0.82
Trav8-1A0A075B641 Gm9726-201ENSMUST00000180321 678 ntBASIC9.96□□□□□ -0.82
Trav8-1A0A075B641 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC9.96□□□□□ -0.82
Trav8-1A0A075B641 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav8-1A0A075B641 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC9.96□□□□□ -0.82
Trav8-1A0A075B641 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trav8-1A0A075B641 Gm10252-201ENSMUST00000209541 832 ntBASIC9.96□□□□□ -0.82
Trav8-1A0A075B641 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC9.96□□□□□ -0.82
Trav8-1A0A075B641 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trav8-1A0A075B641 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC9.96□□□□□ -0.82
Trav8-1A0A075B641 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav8-1A0A075B641 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav8-1A0A075B641 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC9.96□□□□□ -0.82
Trav8-1A0A075B641 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav8-1A0A075B641 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav8-1A0A075B641 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC9.96□□□□□ -0.82
Trav8-1A0A075B641 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav8-1A0A075B641 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav8-1A0A075B641 AC139054.1-201ENSMUST00000226898 1598 ntBASIC9.96□□□□□ -0.82
Trav8-1A0A075B641 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trav8-1A0A075B641 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav8-1A0A075B641 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav8-1A0A075B641 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav8-1A0A075B641 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav8-1A0A075B641 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Trav8-1A0A075B641 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav8-1A0A075B641 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trav8-1A0A075B641 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav8-1A0A075B641 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav8-1A0A075B641 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Trav8-1A0A075B641 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav8-1A0A075B641 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav8-1A0A075B641 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC9.95□□□□□ -0.82
Trav8-1A0A075B641 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav8-1A0A075B641 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav8-1A0A075B641 Gm20554-201ENSMUST00000177421 2352 ntBASIC9.95□□□□□ -0.82
Trav8-1A0A075B641 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav8-1A0A075B641 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav8-1A0A075B641 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Trav8-1A0A075B641 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav8-1A0A075B641 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav8-1A0A075B641 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav8-1A0A075B641 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav8-1A0A075B641 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav8-1A0A075B641 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav8-1A0A075B641 AA414768-201ENSMUST00000121924 1257 ntBASIC9.95□□□□□ -0.82
Trav8-1A0A075B641 Gm23634-201ENSMUST00000175071 91 ntBASIC9.95□□□□□ -0.82
Trav8-1A0A075B641 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC9.95□□□□□ -0.82
Trav8-1A0A075B641 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC9.95□□□□□ -0.82
Trav8-1A0A075B641 Gm8655-201ENSMUST00000221159 852 ntBASIC9.95□□□□□ -0.82
Trav8-1A0A075B641 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav8-1A0A075B641 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav8-1A0A075B641 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav8-1A0A075B641 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav8-1A0A075B641 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav8-1A0A075B641 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav8-1A0A075B641 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav8-1A0A075B641 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav8-1A0A075B641 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav8-1A0A075B641 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav8-1A0A075B641 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav8-1A0A075B641 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC9.95□□□□□ -0.82
Trav8-1A0A075B641 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav8-1A0A075B641 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav8-1A0A075B641 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav8-1A0A075B641 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav8-1A0A075B641 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav8-1A0A075B641 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav8-1A0A075B641 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav8-1A0A075B641 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav8-1A0A075B641 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav8-1A0A075B641 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav8-1A0A075B641 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav8-1A0A075B641 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav8-1A0A075B641 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms