Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb3S4R1G7 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb3S4R1G7 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb3S4R1G7 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb3S4R1G7 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb3S4R1G7 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb3S4R1G7 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.55□□□□□ -0.4
H2afb3S4R1G7 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
H2afb3S4R1G7 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb3S4R1G7 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb3S4R1G7 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb3S4R1G7 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb3S4R1G7 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb3S4R1G7 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb3S4R1G7 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb3S4R1G7 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb3S4R1G7 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.55□□□□□ -0.4
H2afb3S4R1G7 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
H2afb3S4R1G7 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb3S4R1G7 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb3S4R1G7 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
H2afb3S4R1G7 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
H2afb3S4R1G7 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb3S4R1G7 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb3S4R1G7 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb3S4R1G7 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
H2afb3S4R1G7 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb3S4R1G7 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb3S4R1G7 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb3S4R1G7 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
H2afb3S4R1G7 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb3S4R1G7 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.54□□□□□ -0.4
H2afb3S4R1G7 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.54□□□□□ -0.4
H2afb3S4R1G7 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb3S4R1G7 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb3S4R1G7 Gm15957-201ENSMUST00000118893 974 ntBASIC12.54□□□□□ -0.4
H2afb3S4R1G7 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb3S4R1G7 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb3S4R1G7 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.54□□□□□ -0.4
H2afb3S4R1G7 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb3S4R1G7 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC12.54□□□□□ -0.4
H2afb3S4R1G7 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.54□□□□□ -0.4
H2afb3S4R1G7 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb3S4R1G7 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb3S4R1G7 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb3S4R1G7 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb3S4R1G7 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
H2afb3S4R1G7 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.54□□□□□ -0.4
H2afb3S4R1G7 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb3S4R1G7 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.54□□□□□ -0.4
H2afb3S4R1G7 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb3S4R1G7 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb3S4R1G7 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb3S4R1G7 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb3S4R1G7 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb3S4R1G7 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb3S4R1G7 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.54□□□□□ -0.4
H2afb3S4R1G7 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb3S4R1G7 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb3S4R1G7 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb3S4R1G7 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb3S4R1G7 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb3S4R1G7 Acot6-202ENSMUST00000222921 3622 ntBASIC12.54□□□□□ -0.4
H2afb3S4R1G7 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.54□□□□□ -0.4
H2afb3S4R1G7 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb3S4R1G7 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb3S4R1G7 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.53□□□□□ -0.4
H2afb3S4R1G7 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb3S4R1G7 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.53□□□□□ -0.4
H2afb3S4R1G7 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb3S4R1G7 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb3S4R1G7 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb3S4R1G7 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb3S4R1G7 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb3S4R1G7 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12.53□□□□□ -0.4
H2afb3S4R1G7 Gm4913-201ENSMUST00000117075 1290 ntBASIC12.53□□□□□ -0.4
H2afb3S4R1G7 Gm11779-201ENSMUST00000118541 368 ntBASIC12.53□□□□□ -0.4
H2afb3S4R1G7 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb3S4R1G7 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb3S4R1G7 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb3S4R1G7 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb3S4R1G7 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC12.53□□□□□ -0.4
H2afb3S4R1G7 Gm5712-201ENSMUST00000199748 1043 ntBASIC12.53□□□□□ -0.4
H2afb3S4R1G7 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb3S4R1G7 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.53□□□□□ -0.4
H2afb3S4R1G7 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
H2afb3S4R1G7 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
H2afb3S4R1G7 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb3S4R1G7 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb3S4R1G7 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb3S4R1G7 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb3S4R1G7 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.53□□□□□ -0.4
H2afb3S4R1G7 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb3S4R1G7 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb3S4R1G7 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
H2afb3S4R1G7 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb3S4R1G7 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb3S4R1G7 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.53□□□□□ -0.4
H2afb3S4R1G7 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb3S4R1G7 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms