Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cx3cr1Q9Z0D9 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cx3cr1Q9Z0D9 Gm13410-201ENSMUST00000117058 1415 ntBASIC11.8□□□□□ -0.52
Cx3cr1Q9Z0D9 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cx3cr1Q9Z0D9 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cx3cr1Q9Z0D9 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cx3cr1Q9Z0D9 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Cx3cr1Q9Z0D9 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cx3cr1Q9Z0D9 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Cx3cr1Q9Z0D9 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cx3cr1Q9Z0D9 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC11.8□□□□□ -0.52
Cx3cr1Q9Z0D9 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cx3cr1Q9Z0D9 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cx3cr1Q9Z0D9 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC11.8□□□□□ -0.52
Cx3cr1Q9Z0D9 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC11.8□□□□□ -0.52
Cx3cr1Q9Z0D9 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cx3cr1Q9Z0D9 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cx3cr1Q9Z0D9 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cx3cr1Q9Z0D9 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cx3cr1Q9Z0D9 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cx3cr1Q9Z0D9 Gm37644-201ENSMUST00000192190 2270 ntBASIC11.8□□□□□ -0.52
Cx3cr1Q9Z0D9 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cx3cr1Q9Z0D9 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cx3cr1Q9Z0D9 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Cx3cr1Q9Z0D9 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cx3cr1Q9Z0D9 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cx3cr1Q9Z0D9 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cx3cr1Q9Z0D9 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Cx3cr1Q9Z0D9 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cx3cr1Q9Z0D9 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Cx3cr1Q9Z0D9 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cx3cr1Q9Z0D9 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cx3cr1Q9Z0D9 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Cx3cr1Q9Z0D9 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cx3cr1Q9Z0D9 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cx3cr1Q9Z0D9 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cx3cr1Q9Z0D9 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cx3cr1Q9Z0D9 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cx3cr1Q9Z0D9 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cx3cr1Q9Z0D9 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cx3cr1Q9Z0D9 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cx3cr1Q9Z0D9 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cx3cr1Q9Z0D9 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cx3cr1Q9Z0D9 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cx3cr1Q9Z0D9 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cx3cr1Q9Z0D9 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cx3cr1Q9Z0D9 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cx3cr1Q9Z0D9 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cx3cr1Q9Z0D9 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cx3cr1Q9Z0D9 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cx3cr1Q9Z0D9 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cx3cr1Q9Z0D9 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cx3cr1Q9Z0D9 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC11.79□□□□□ -0.52
Cx3cr1Q9Z0D9 AC084391.1-201ENSMUST00000200651 141 ntBASIC11.79□□□□□ -0.52
Cx3cr1Q9Z0D9 Klk2-ps-201ENSMUST00000205342 571 ntBASIC11.79□□□□□ -0.52
Cx3cr1Q9Z0D9 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC11.79□□□□□ -0.52
Cx3cr1Q9Z0D9 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cx3cr1Q9Z0D9 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cx3cr1Q9Z0D9 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cx3cr1Q9Z0D9 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Cx3cr1Q9Z0D9 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.79□□□□□ -0.52
Cx3cr1Q9Z0D9 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cx3cr1Q9Z0D9 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC11.79□□□□□ -0.52
Cx3cr1Q9Z0D9 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cx3cr1Q9Z0D9 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cx3cr1Q9Z0D9 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cx3cr1Q9Z0D9 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cx3cr1Q9Z0D9 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cx3cr1Q9Z0D9 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Cx3cr1Q9Z0D9 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cx3cr1Q9Z0D9 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cx3cr1Q9Z0D9 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cx3cr1Q9Z0D9 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cx3cr1Q9Z0D9 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cx3cr1Q9Z0D9 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cx3cr1Q9Z0D9 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cx3cr1Q9Z0D9 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cx3cr1Q9Z0D9 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cx3cr1Q9Z0D9 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cx3cr1Q9Z0D9 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cx3cr1Q9Z0D9 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cx3cr1Q9Z0D9 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Cx3cr1Q9Z0D9 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cx3cr1Q9Z0D9 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cx3cr1Q9Z0D9 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cx3cr1Q9Z0D9 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC11.78□□□□□ -0.52
Cx3cr1Q9Z0D9 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Cx3cr1Q9Z0D9 Gm2445-201ENSMUST00000182798 989 ntBASIC11.78□□□□□ -0.52
Cx3cr1Q9Z0D9 Gm27301-201ENSMUST00000184012 127 ntBASIC11.78□□□□□ -0.52
Cx3cr1Q9Z0D9 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC11.78□□□□□ -0.52
Cx3cr1Q9Z0D9 Gm44608-201ENSMUST00000206827 855 ntBASIC11.78□□□□□ -0.52
Cx3cr1Q9Z0D9 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC11.78□□□□□ -0.52
Cx3cr1Q9Z0D9 AC158538.1-201ENSMUST00000225870 294 ntBASIC11.78□□□□□ -0.52
Cx3cr1Q9Z0D9 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Cx3cr1Q9Z0D9 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cx3cr1Q9Z0D9 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Cx3cr1Q9Z0D9 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Cx3cr1Q9Z0D9 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.78□□□□□ -0.52
Cx3cr1Q9Z0D9 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cx3cr1Q9Z0D9 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms