Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn8aQ9WTU3 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn8aQ9WTU3 Gm11478-201ENSMUST00000117851 599 ntBASIC13.92□□□□□ -0.18
Scn8aQ9WTU3 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.92□□□□□ -0.18
Scn8aQ9WTU3 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.92□□□□□ -0.18
Scn8aQ9WTU3 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.92□□□□□ -0.18
Scn8aQ9WTU3 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.92□□□□□ -0.18
Scn8aQ9WTU3 Gm17330-201ENSMUST00000221047 165 ntBASIC13.92□□□□□ -0.18
Scn8aQ9WTU3 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn8aQ9WTU3 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Scn8aQ9WTU3 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn8aQ9WTU3 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Scn8aQ9WTU3 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.92□□□□□ -0.18
Scn8aQ9WTU3 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn8aQ9WTU3 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.92□□□□□ -0.18
Scn8aQ9WTU3 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn8aQ9WTU3 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn8aQ9WTU3 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Scn8aQ9WTU3 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn8aQ9WTU3 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn8aQ9WTU3 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Scn8aQ9WTU3 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn8aQ9WTU3 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Scn8aQ9WTU3 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn8aQ9WTU3 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn8aQ9WTU3 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Scn8aQ9WTU3 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.91□□□□□ -0.18
Scn8aQ9WTU3 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Scn8aQ9WTU3 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.91□□□□□ -0.18
Scn8aQ9WTU3 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.91□□□□□ -0.18
Scn8aQ9WTU3 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Scn8aQ9WTU3 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.91□□□□□ -0.18
Scn8aQ9WTU3 Gm27892-201ENSMUST00000185017 106 ntBASIC13.91□□□□□ -0.18
Scn8aQ9WTU3 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.91□□□□□ -0.18
Scn8aQ9WTU3 Gm5035-201ENSMUST00000215581 927 ntBASIC13.91□□□□□ -0.18
Scn8aQ9WTU3 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.91□□□□□ -0.18
Scn8aQ9WTU3 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn8aQ9WTU3 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Scn8aQ9WTU3 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn8aQ9WTU3 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn8aQ9WTU3 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn8aQ9WTU3 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn8aQ9WTU3 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn8aQ9WTU3 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Scn8aQ9WTU3 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn8aQ9WTU3 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn8aQ9WTU3 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Scn8aQ9WTU3 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn8aQ9WTU3 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Scn8aQ9WTU3 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn8aQ9WTU3 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn8aQ9WTU3 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Scn8aQ9WTU3 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn8aQ9WTU3 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn8aQ9WTU3 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Scn8aQ9WTU3 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.91□□□□□ -0.18
Scn8aQ9WTU3 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn8aQ9WTU3 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Scn8aQ9WTU3 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Scn8aQ9WTU3 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scn8aQ9WTU3 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scn8aQ9WTU3 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scn8aQ9WTU3 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scn8aQ9WTU3 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.9□□□□□ -0.18
Scn8aQ9WTU3 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Scn8aQ9WTU3 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scn8aQ9WTU3 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Scn8aQ9WTU3 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scn8aQ9WTU3 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Scn8aQ9WTU3 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.9□□□□□ -0.18
Scn8aQ9WTU3 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scn8aQ9WTU3 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scn8aQ9WTU3 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scn8aQ9WTU3 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Scn8aQ9WTU3 Gm9002-201ENSMUST00000178437 499 ntBASIC13.9□□□□□ -0.18
Scn8aQ9WTU3 Gm6244-201ENSMUST00000178732 841 ntBASIC13.9□□□□□ -0.18
Scn8aQ9WTU3 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Scn8aQ9WTU3 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Scn8aQ9WTU3 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Scn8aQ9WTU3 Gm18473-201ENSMUST00000220543 868 ntBASIC13.9□□□□□ -0.18
Scn8aQ9WTU3 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scn8aQ9WTU3 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Scn8aQ9WTU3 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scn8aQ9WTU3 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Scn8aQ9WTU3 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Scn8aQ9WTU3 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scn8aQ9WTU3 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scn8aQ9WTU3 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scn8aQ9WTU3 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Scn8aQ9WTU3 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scn8aQ9WTU3 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scn8aQ9WTU3 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scn8aQ9WTU3 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.89□□□□□ -0.19
Scn8aQ9WTU3 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.89□□□□□ -0.19
Scn8aQ9WTU3 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn8aQ9WTU3 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn8aQ9WTU3 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.89□□□□□ -0.19
Scn8aQ9WTU3 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.89□□□□□ -0.19
Scn8aQ9WTU3 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn8aQ9WTU3 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms