Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3aQ9JKX8 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3aQ9JKX8 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3aQ9JKX8 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3aQ9JKX8 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Upk3aQ9JKX8 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3aQ9JKX8 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3aQ9JKX8 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3aQ9JKX8 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.39□□□□□ -0.27
Upk3aQ9JKX8 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3aQ9JKX8 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.39□□□□□ -0.27
Upk3aQ9JKX8 Gm16215-201ENSMUST00000161990 637 ntBASIC13.39□□□□□ -0.27
Upk3aQ9JKX8 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3aQ9JKX8 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Upk3aQ9JKX8 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.39□□□□□ -0.27
Upk3aQ9JKX8 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Upk3aQ9JKX8 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.39□□□□□ -0.27
Upk3aQ9JKX8 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3aQ9JKX8 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3aQ9JKX8 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.39□□□□□ -0.27
Upk3aQ9JKX8 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Upk3aQ9JKX8 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3aQ9JKX8 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.39□□□□□ -0.27
Upk3aQ9JKX8 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.39□□□□□ -0.27
Upk3aQ9JKX8 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Upk3aQ9JKX8 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3aQ9JKX8 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.39□□□□□ -0.27
Upk3aQ9JKX8 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3aQ9JKX8 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3aQ9JKX8 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3aQ9JKX8 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3aQ9JKX8 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3aQ9JKX8 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3aQ9JKX8 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3aQ9JKX8 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk3aQ9JKX8 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.38□□□□□ -0.27
Upk3aQ9JKX8 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Upk3aQ9JKX8 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk3aQ9JKX8 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Upk3aQ9JKX8 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.38□□□□□ -0.27
Upk3aQ9JKX8 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk3aQ9JKX8 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Upk3aQ9JKX8 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk3aQ9JKX8 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.38□□□□□ -0.27
Upk3aQ9JKX8 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
Upk3aQ9JKX8 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk3aQ9JKX8 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
Upk3aQ9JKX8 Gm25925-201ENSMUST00000158314 306 ntBASIC13.38□□□□□ -0.27
Upk3aQ9JKX8 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.38□□□□□ -0.27
Upk3aQ9JKX8 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.38□□□□□ -0.27
Upk3aQ9JKX8 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Upk3aQ9JKX8 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Upk3aQ9JKX8 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Upk3aQ9JKX8 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.38□□□□□ -0.27
Upk3aQ9JKX8 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.38□□□□□ -0.27
Upk3aQ9JKX8 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk3aQ9JKX8 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk3aQ9JKX8 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk3aQ9JKX8 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk3aQ9JKX8 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk3aQ9JKX8 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.38□□□□□ -0.27
Upk3aQ9JKX8 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Upk3aQ9JKX8 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.38□□□□□ -0.27
Upk3aQ9JKX8 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk3aQ9JKX8 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk3aQ9JKX8 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Upk3aQ9JKX8 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk3aQ9JKX8 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Upk3aQ9JKX8 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk3aQ9JKX8 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Upk3aQ9JKX8 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk3aQ9JKX8 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.37□□□□□ -0.27
Upk3aQ9JKX8 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Upk3aQ9JKX8 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk3aQ9JKX8 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk3aQ9JKX8 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk3aQ9JKX8 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk3aQ9JKX8 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Upk3aQ9JKX8 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.37□□□□□ -0.27
Upk3aQ9JKX8 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Upk3aQ9JKX8 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.37□□□□□ -0.27
Upk3aQ9JKX8 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.37□□□□□ -0.27
Upk3aQ9JKX8 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.37□□□□□ -0.27
Upk3aQ9JKX8 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.37□□□□□ -0.27
Upk3aQ9JKX8 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.37□□□□□ -0.27
Upk3aQ9JKX8 Gm7730-201ENSMUST00000212486 454 ntBASIC13.37□□□□□ -0.27
Upk3aQ9JKX8 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.37□□□□□ -0.27
Upk3aQ9JKX8 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk3aQ9JKX8 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk3aQ9JKX8 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Upk3aQ9JKX8 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk3aQ9JKX8 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk3aQ9JKX8 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk3aQ9JKX8 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Upk3aQ9JKX8 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk3aQ9JKX8 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk3aQ9JKX8 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk3aQ9JKX8 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.37□□□□□ -0.27
Upk3aQ9JKX8 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Upk3aQ9JKX8 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms