Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpne8Q9DC53 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpne8Q9DC53 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpne8Q9DC53 Gm24543-201ENSMUST00000103867 82 ntBASIC14.54□□□□□ -0.08
Cpne8Q9DC53 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cpne8Q9DC53 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.54□□□□□ -0.08
Cpne8Q9DC53 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.54□□□□□ -0.08
Cpne8Q9DC53 Gm10253-201ENSMUST00000194270 940 ntBASIC14.54□□□□□ -0.08
Cpne8Q9DC53 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cpne8Q9DC53 Gm5312-201ENSMUST00000203728 547 ntBASIC14.54□□□□□ -0.08
Cpne8Q9DC53 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.54□□□□□ -0.08
Cpne8Q9DC53 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Cpne8Q9DC53 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpne8Q9DC53 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpne8Q9DC53 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpne8Q9DC53 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cpne8Q9DC53 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpne8Q9DC53 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cpne8Q9DC53 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.54□□□□□ -0.08
Cpne8Q9DC53 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Cpne8Q9DC53 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cpne8Q9DC53 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Cpne8Q9DC53 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpne8Q9DC53 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpne8Q9DC53 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cpne8Q9DC53 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpne8Q9DC53 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpne8Q9DC53 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpne8Q9DC53 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpne8Q9DC53 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cpne8Q9DC53 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cpne8Q9DC53 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.53□□□□□ -0.08
Cpne8Q9DC53 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.53□□□□□ -0.08
Cpne8Q9DC53 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpne8Q9DC53 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Cpne8Q9DC53 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.53□□□□□ -0.08
Cpne8Q9DC53 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpne8Q9DC53 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Cpne8Q9DC53 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.53□□□□□ -0.08
Cpne8Q9DC53 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.53□□□□□ -0.08
Cpne8Q9DC53 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Cpne8Q9DC53 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.53□□□□□ -0.08
Cpne8Q9DC53 Gm25948-201ENSMUST00000175334 112 ntBASIC14.53□□□□□ -0.08
Cpne8Q9DC53 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpne8Q9DC53 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Cpne8Q9DC53 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.53□□□□□ -0.08
Cpne8Q9DC53 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpne8Q9DC53 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpne8Q9DC53 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpne8Q9DC53 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpne8Q9DC53 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpne8Q9DC53 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpne8Q9DC53 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpne8Q9DC53 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpne8Q9DC53 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpne8Q9DC53 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpne8Q9DC53 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpne8Q9DC53 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpne8Q9DC53 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cpne8Q9DC53 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Cpne8Q9DC53 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cpne8Q9DC53 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.52□□□□□ -0.08
Cpne8Q9DC53 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cpne8Q9DC53 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cpne8Q9DC53 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cpne8Q9DC53 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cpne8Q9DC53 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.52□□□□□ -0.08
Cpne8Q9DC53 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cpne8Q9DC53 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cpne8Q9DC53 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cpne8Q9DC53 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Cpne8Q9DC53 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cpne8Q9DC53 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cpne8Q9DC53 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Cpne8Q9DC53 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cpne8Q9DC53 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Cpne8Q9DC53 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cpne8Q9DC53 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cpne8Q9DC53 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Cpne8Q9DC53 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.52□□□□□ -0.09
Cpne8Q9DC53 Gm15693-201ENSMUST00000120470 637 ntBASIC14.52□□□□□ -0.09
Cpne8Q9DC53 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cpne8Q9DC53 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
Cpne8Q9DC53 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cpne8Q9DC53 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Cpne8Q9DC53 Gm27533-201ENSMUST00000183800 152 ntBASIC14.52□□□□□ -0.09
Cpne8Q9DC53 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Cpne8Q9DC53 Gm2213-201ENSMUST00000197485 688 ntBASIC14.52□□□□□ -0.09
Cpne8Q9DC53 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.52□□□□□ -0.09
Cpne8Q9DC53 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.52□□□□□ -0.09
Cpne8Q9DC53 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cpne8Q9DC53 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cpne8Q9DC53 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cpne8Q9DC53 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cpne8Q9DC53 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cpne8Q9DC53 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cpne8Q9DC53 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cpne8Q9DC53 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cpne8Q9DC53 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cpne8Q9DC53 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms