Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3a3Q9D554 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3a3Q9D554 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.12□□□□□ -0.15
Sf3a3Q9D554 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3a3Q9D554 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3a3Q9D554 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3a3Q9D554 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3a3Q9D554 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3a3Q9D554 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3a3Q9D554 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3a3Q9D554 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.12□□□□□ -0.15
Sf3a3Q9D554 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Sf3a3Q9D554 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC14.12□□□□□ -0.15
Sf3a3Q9D554 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3a3Q9D554 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3a3Q9D554 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Sf3a3Q9D554 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3a3Q9D554 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3a3Q9D554 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3a3Q9D554 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.11□□□□□ -0.15
Sf3a3Q9D554 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3a3Q9D554 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.11□□□□□ -0.15
Sf3a3Q9D554 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3a3Q9D554 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3a3Q9D554 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3a3Q9D554 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3a3Q9D554 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.11□□□□□ -0.15
Sf3a3Q9D554 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3a3Q9D554 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3a3Q9D554 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3a3Q9D554 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Sf3a3Q9D554 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3a3Q9D554 Gm13418-201ENSMUST00000119097 944 ntBASIC14.11□□□□□ -0.15
Sf3a3Q9D554 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3a3Q9D554 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3a3Q9D554 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3a3Q9D554 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.11□□□□□ -0.15
Sf3a3Q9D554 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Sf3a3Q9D554 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
Sf3a3Q9D554 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3a3Q9D554 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.11□□□□□ -0.15
Sf3a3Q9D554 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3a3Q9D554 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3a3Q9D554 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3a3Q9D554 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3a3Q9D554 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3a3Q9D554 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3a3Q9D554 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3a3Q9D554 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Sf3a3Q9D554 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3a3Q9D554 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3a3Q9D554 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Sf3a3Q9D554 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3a3Q9D554 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3a3Q9D554 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.1□□□□□ -0.15
Sf3a3Q9D554 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3a3Q9D554 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3a3Q9D554 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Sf3a3Q9D554 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3a3Q9D554 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3a3Q9D554 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3a3Q9D554 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3a3Q9D554 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3a3Q9D554 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3a3Q9D554 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3a3Q9D554 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3a3Q9D554 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3a3Q9D554 Gm13836-201ENSMUST00000121159 501 ntBASIC14.1□□□□□ -0.15
Sf3a3Q9D554 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3a3Q9D554 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3a3Q9D554 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.1□□□□□ -0.15
Sf3a3Q9D554 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.1□□□□□ -0.15
Sf3a3Q9D554 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.1□□□□□ -0.15
Sf3a3Q9D554 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3a3Q9D554 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3a3Q9D554 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Sf3a3Q9D554 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3a3Q9D554 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3a3Q9D554 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3a3Q9D554 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC14.1□□□□□ -0.15
Sf3a3Q9D554 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3a3Q9D554 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Sf3a3Q9D554 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3a3Q9D554 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3a3Q9D554 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.09□□□□□ -0.15
Sf3a3Q9D554 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Sf3a3Q9D554 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.09□□□□□ -0.15
Sf3a3Q9D554 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sf3a3Q9D554 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.09□□□□□ -0.15
Sf3a3Q9D554 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sf3a3Q9D554 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Sf3a3Q9D554 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sf3a3Q9D554 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC14.09□□□□□ -0.15
Sf3a3Q9D554 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sf3a3Q9D554 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sf3a3Q9D554 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.09□□□□□ -0.15
Sf3a3Q9D554 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sf3a3Q9D554 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sf3a3Q9D554 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sf3a3Q9D554 Gm37153-201ENSMUST00000193637 231 ntBASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms