Protein–RNA interactions for Protein: Q9CZQ6

Raet1e, Retinoic acid early-inducible protein 1-epsilon, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1eQ9CZQ6 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Raet1eQ9CZQ6 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Raet1eQ9CZQ6 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Raet1eQ9CZQ6 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Raet1eQ9CZQ6 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.25□□□□□ -0.45
Raet1eQ9CZQ6 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Raet1eQ9CZQ6 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Raet1eQ9CZQ6 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Raet1eQ9CZQ6 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Raet1eQ9CZQ6 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Raet1eQ9CZQ6 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Raet1eQ9CZQ6 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Raet1eQ9CZQ6 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Raet1eQ9CZQ6 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Raet1eQ9CZQ6 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Raet1eQ9CZQ6 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Raet1eQ9CZQ6 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Raet1eQ9CZQ6 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Raet1eQ9CZQ6 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Raet1eQ9CZQ6 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Raet1eQ9CZQ6 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Raet1eQ9CZQ6 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Raet1eQ9CZQ6 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Raet1eQ9CZQ6 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Raet1eQ9CZQ6 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Raet1eQ9CZQ6 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Raet1eQ9CZQ6 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Raet1eQ9CZQ6 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.24□□□□□ -0.45
Raet1eQ9CZQ6 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Raet1eQ9CZQ6 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Raet1eQ9CZQ6 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.24□□□□□ -0.45
Raet1eQ9CZQ6 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.24□□□□□ -0.45
Raet1eQ9CZQ6 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Raet1eQ9CZQ6 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Raet1eQ9CZQ6 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Raet1eQ9CZQ6 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Raet1eQ9CZQ6 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Raet1eQ9CZQ6 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Raet1eQ9CZQ6 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Raet1eQ9CZQ6 Gm7230-201ENSMUST00000173026 815 ntBASIC12.24□□□□□ -0.45
Raet1eQ9CZQ6 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Raet1eQ9CZQ6 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Raet1eQ9CZQ6 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Raet1eQ9CZQ6 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.24□□□□□ -0.45
Raet1eQ9CZQ6 Gm6550-201ENSMUST00000187574 993 ntBASIC12.24□□□□□ -0.45
Raet1eQ9CZQ6 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Raet1eQ9CZQ6 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.24□□□□□ -0.45
Raet1eQ9CZQ6 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Raet1eQ9CZQ6 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Raet1eQ9CZQ6 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Raet1eQ9CZQ6 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Raet1eQ9CZQ6 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Raet1eQ9CZQ6 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Raet1eQ9CZQ6 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Raet1eQ9CZQ6 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Raet1eQ9CZQ6 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Raet1eQ9CZQ6 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Raet1eQ9CZQ6 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Raet1eQ9CZQ6 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Raet1eQ9CZQ6 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Raet1eQ9CZQ6 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Raet1eQ9CZQ6 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Raet1eQ9CZQ6 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Raet1eQ9CZQ6 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Raet1eQ9CZQ6 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.23□□□□□ -0.45
Raet1eQ9CZQ6 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Raet1eQ9CZQ6 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Raet1eQ9CZQ6 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Raet1eQ9CZQ6 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Raet1eQ9CZQ6 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Raet1eQ9CZQ6 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Raet1eQ9CZQ6 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Raet1eQ9CZQ6 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Raet1eQ9CZQ6 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Raet1eQ9CZQ6 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Raet1eQ9CZQ6 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.23□□□□□ -0.45
Raet1eQ9CZQ6 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Raet1eQ9CZQ6 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Raet1eQ9CZQ6 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Raet1eQ9CZQ6 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Raet1eQ9CZQ6 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Raet1eQ9CZQ6 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Raet1eQ9CZQ6 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Raet1eQ9CZQ6 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.23□□□□□ -0.45
Raet1eQ9CZQ6 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC12.23□□□□□ -0.45
Raet1eQ9CZQ6 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Raet1eQ9CZQ6 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.23□□□□□ -0.45
Raet1eQ9CZQ6 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.23□□□□□ -0.45
Raet1eQ9CZQ6 Gm10252-201ENSMUST00000209541 832 ntBASIC12.23□□□□□ -0.45
Raet1eQ9CZQ6 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Raet1eQ9CZQ6 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Raet1eQ9CZQ6 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.23□□□□□ -0.45
Raet1eQ9CZQ6 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Raet1eQ9CZQ6 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Raet1eQ9CZQ6 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Raet1eQ9CZQ6 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Raet1eQ9CZQ6 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Raet1eQ9CZQ6 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Raet1eQ9CZQ6 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Raet1eQ9CZQ6 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms