Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pfdn1Q9CWM4 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pfdn1Q9CWM4 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC12.2□□□□□ -0.46
Pfdn1Q9CWM4 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pfdn1Q9CWM4 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pfdn1Q9CWM4 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pfdn1Q9CWM4 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pfdn1Q9CWM4 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.2□□□□□ -0.46
Pfdn1Q9CWM4 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pfdn1Q9CWM4 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pfdn1Q9CWM4 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.2□□□□□ -0.46
Pfdn1Q9CWM4 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pfdn1Q9CWM4 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pfdn1Q9CWM4 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.2□□□□□ -0.46
Pfdn1Q9CWM4 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.2□□□□□ -0.46
Pfdn1Q9CWM4 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pfdn1Q9CWM4 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pfdn1Q9CWM4 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pfdn1Q9CWM4 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pfdn1Q9CWM4 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pfdn1Q9CWM4 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Pfdn1Q9CWM4 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pfdn1Q9CWM4 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pfdn1Q9CWM4 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pfdn1Q9CWM4 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Pfdn1Q9CWM4 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pfdn1Q9CWM4 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pfdn1Q9CWM4 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.19□□□□□ -0.46
Pfdn1Q9CWM4 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pfdn1Q9CWM4 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pfdn1Q9CWM4 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pfdn1Q9CWM4 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pfdn1Q9CWM4 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Pfdn1Q9CWM4 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pfdn1Q9CWM4 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.19□□□□□ -0.46
Pfdn1Q9CWM4 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Pfdn1Q9CWM4 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pfdn1Q9CWM4 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pfdn1Q9CWM4 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pfdn1Q9CWM4 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pfdn1Q9CWM4 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pfdn1Q9CWM4 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pfdn1Q9CWM4 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pfdn1Q9CWM4 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pfdn1Q9CWM4 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.19□□□□□ -0.46
Pfdn1Q9CWM4 AC153881.1-201ENSMUST00000214448 284 ntBASIC12.19□□□□□ -0.46
Pfdn1Q9CWM4 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pfdn1Q9CWM4 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pfdn1Q9CWM4 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pfdn1Q9CWM4 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pfdn1Q9CWM4 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pfdn1Q9CWM4 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pfdn1Q9CWM4 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pfdn1Q9CWM4 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.19□□□□□ -0.46
Pfdn1Q9CWM4 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pfdn1Q9CWM4 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Pfdn1Q9CWM4 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pfdn1Q9CWM4 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pfdn1Q9CWM4 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pfdn1Q9CWM4 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.19□□□□□ -0.46
Pfdn1Q9CWM4 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Pfdn1Q9CWM4 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pfdn1Q9CWM4 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.19□□□□□ -0.46
Pfdn1Q9CWM4 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pfdn1Q9CWM4 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pfdn1Q9CWM4 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pfdn1Q9CWM4 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pfdn1Q9CWM4 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.19□□□□□ -0.46
Pfdn1Q9CWM4 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pfdn1Q9CWM4 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pfdn1Q9CWM4 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pfdn1Q9CWM4 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Pfdn1Q9CWM4 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pfdn1Q9CWM4 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Pfdn1Q9CWM4 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Pfdn1Q9CWM4 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pfdn1Q9CWM4 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pfdn1Q9CWM4 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pfdn1Q9CWM4 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pfdn1Q9CWM4 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pfdn1Q9CWM4 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pfdn1Q9CWM4 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pfdn1Q9CWM4 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Pfdn1Q9CWM4 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.18□□□□□ -0.46
Pfdn1Q9CWM4 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pfdn1Q9CWM4 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pfdn1Q9CWM4 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.18□□□□□ -0.46
Pfdn1Q9CWM4 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC12.18□□□□□ -0.46
Pfdn1Q9CWM4 Gm9172-201ENSMUST00000212092 954 ntBASIC12.18□□□□□ -0.46
Pfdn1Q9CWM4 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC12.18□□□□□ -0.46
Pfdn1Q9CWM4 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pfdn1Q9CWM4 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pfdn1Q9CWM4 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pfdn1Q9CWM4 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pfdn1Q9CWM4 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Pfdn1Q9CWM4 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pfdn1Q9CWM4 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Pfdn1Q9CWM4 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.18□□□□□ -0.46
Pfdn1Q9CWM4 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pfdn1Q9CWM4 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms