Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col25a1Q99MQ5 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.41□□□□□ -0.1
Col25a1Q99MQ5 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.41□□□□□ -0.1
Col25a1Q99MQ5 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col25a1Q99MQ5 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col25a1Q99MQ5 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col25a1Q99MQ5 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col25a1Q99MQ5 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col25a1Q99MQ5 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col25a1Q99MQ5 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Col25a1Q99MQ5 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Col25a1Q99MQ5 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col25a1Q99MQ5 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col25a1Q99MQ5 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col25a1Q99MQ5 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col25a1Q99MQ5 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col25a1Q99MQ5 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col25a1Q99MQ5 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col25a1Q99MQ5 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Col25a1Q99MQ5 Gm11803-201ENSMUST00000119966 444 ntBASIC14.4□□□□□ -0.1
Col25a1Q99MQ5 Gm10156-201ENSMUST00000122364 462 ntBASIC14.4□□□□□ -0.1
Col25a1Q99MQ5 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col25a1Q99MQ5 Mir1943-201ENSMUST00000158276 73 ntBASIC14.4□□□□□ -0.1
Col25a1Q99MQ5 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC14.4□□□□□ -0.1
Col25a1Q99MQ5 Gm6621-201ENSMUST00000193251 772 ntBASIC14.4□□□□□ -0.1
Col25a1Q99MQ5 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col25a1Q99MQ5 D9Wsu149-201ENSMUST00000214169 594 ntBASIC14.4□□□□□ -0.1
Col25a1Q99MQ5 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col25a1Q99MQ5 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col25a1Q99MQ5 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col25a1Q99MQ5 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col25a1Q99MQ5 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col25a1Q99MQ5 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Col25a1Q99MQ5 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col25a1Q99MQ5 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col25a1Q99MQ5 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col25a1Q99MQ5 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.4□□□□□ -0.1
Col25a1Q99MQ5 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Col25a1Q99MQ5 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col25a1Q99MQ5 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col25a1Q99MQ5 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col25a1Q99MQ5 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col25a1Q99MQ5 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col25a1Q99MQ5 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col25a1Q99MQ5 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Col25a1Q99MQ5 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col25a1Q99MQ5 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col25a1Q99MQ5 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col25a1Q99MQ5 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col25a1Q99MQ5 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Col25a1Q99MQ5 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.39□□□□□ -0.11
Col25a1Q99MQ5 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Col25a1Q99MQ5 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col25a1Q99MQ5 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC14.39□□□□□ -0.11
Col25a1Q99MQ5 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC14.39□□□□□ -0.11
Col25a1Q99MQ5 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col25a1Q99MQ5 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.39□□□□□ -0.11
Col25a1Q99MQ5 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14.39□□□□□ -0.11
Col25a1Q99MQ5 AC153974.2-201ENSMUST00000218577 1025 ntBASIC14.39□□□□□ -0.11
Col25a1Q99MQ5 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.39□□□□□ -0.11
Col25a1Q99MQ5 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col25a1Q99MQ5 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col25a1Q99MQ5 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col25a1Q99MQ5 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col25a1Q99MQ5 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col25a1Q99MQ5 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Col25a1Q99MQ5 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col25a1Q99MQ5 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col25a1Q99MQ5 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.39□□□□□ -0.11
Col25a1Q99MQ5 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col25a1Q99MQ5 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col25a1Q99MQ5 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col25a1Q99MQ5 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col25a1Q99MQ5 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col25a1Q99MQ5 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col25a1Q99MQ5 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC14.39□□□□□ -0.11
Col25a1Q99MQ5 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col25a1Q99MQ5 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Col25a1Q99MQ5 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col25a1Q99MQ5 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col25a1Q99MQ5 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col25a1Q99MQ5 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Col25a1Q99MQ5 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col25a1Q99MQ5 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col25a1Q99MQ5 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col25a1Q99MQ5 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.38□□□□□ -0.11
Col25a1Q99MQ5 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Col25a1Q99MQ5 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col25a1Q99MQ5 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col25a1Q99MQ5 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Col25a1Q99MQ5 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col25a1Q99MQ5 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col25a1Q99MQ5 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col25a1Q99MQ5 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.38□□□□□ -0.11
Col25a1Q99MQ5 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.38□□□□□ -0.11
Col25a1Q99MQ5 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC14.38□□□□□ -0.11
Col25a1Q99MQ5 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col25a1Q99MQ5 Gm27331-201ENSMUST00000183705 60 ntBASIC14.38□□□□□ -0.11
Col25a1Q99MQ5 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.38□□□□□ -0.11
Col25a1Q99MQ5 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms