Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1b1Q99LU0 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.2□□□□□ -0.3
Chmp1b1Q99LU0 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1b1Q99LU0 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.2□□□□□ -0.3
Chmp1b1Q99LU0 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1b1Q99LU0 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1b1Q99LU0 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Chmp1b1Q99LU0 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Chmp1b1Q99LU0 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1b1Q99LU0 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.2□□□□□ -0.3
Chmp1b1Q99LU0 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1b1Q99LU0 Gm7774-201ENSMUST00000200064 533 ntBASIC13.2□□□□□ -0.3
Chmp1b1Q99LU0 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.2□□□□□ -0.3
Chmp1b1Q99LU0 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.2□□□□□ -0.3
Chmp1b1Q99LU0 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1b1Q99LU0 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1b1Q99LU0 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1b1Q99LU0 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1b1Q99LU0 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.2□□□□□ -0.3
Chmp1b1Q99LU0 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
Chmp1b1Q99LU0 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1b1Q99LU0 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Chmp1b1Q99LU0 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1b1Q99LU0 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1b1Q99LU0 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1b1Q99LU0 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1b1Q99LU0 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1b1Q99LU0 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Chmp1b1Q99LU0 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp1b1Q99LU0 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.19□□□□□ -0.3
Chmp1b1Q99LU0 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp1b1Q99LU0 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp1b1Q99LU0 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp1b1Q99LU0 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp1b1Q99LU0 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp1b1Q99LU0 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp1b1Q99LU0 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp1b1Q99LU0 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp1b1Q99LU0 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp1b1Q99LU0 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp1b1Q99LU0 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.19□□□□□ -0.3
Chmp1b1Q99LU0 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp1b1Q99LU0 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.19□□□□□ -0.3
Chmp1b1Q99LU0 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.19□□□□□ -0.3
Chmp1b1Q99LU0 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.19□□□□□ -0.3
Chmp1b1Q99LU0 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.19□□□□□ -0.3
Chmp1b1Q99LU0 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.19□□□□□ -0.3
Chmp1b1Q99LU0 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp1b1Q99LU0 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp1b1Q99LU0 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.19□□□□□ -0.3
Chmp1b1Q99LU0 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp1b1Q99LU0 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp1b1Q99LU0 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.19□□□□□ -0.3
Chmp1b1Q99LU0 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp1b1Q99LU0 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.18□□□□□ -0.3
Chmp1b1Q99LU0 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.18□□□□□ -0.3
Chmp1b1Q99LU0 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp1b1Q99LU0 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.18□□□□□ -0.3
Chmp1b1Q99LU0 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp1b1Q99LU0 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp1b1Q99LU0 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.18□□□□□ -0.3
Chmp1b1Q99LU0 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Chmp1b1Q99LU0 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp1b1Q99LU0 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp1b1Q99LU0 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp1b1Q99LU0 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp1b1Q99LU0 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp1b1Q99LU0 Gm25287-201ENSMUST00000103846 110 ntBASIC13.18□□□□□ -0.3
Chmp1b1Q99LU0 Gm22918-201ENSMUST00000103855 110 ntBASIC13.18□□□□□ -0.3
Chmp1b1Q99LU0 Gm8410-201ENSMUST00000117225 605 ntBASIC13.18□□□□□ -0.3
Chmp1b1Q99LU0 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Chmp1b1Q99LU0 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp1b1Q99LU0 Gm10275-202ENSMUST00000168697 495 ntBASIC13.18□□□□□ -0.3
Chmp1b1Q99LU0 Gm10253-201ENSMUST00000194270 940 ntBASIC13.18□□□□□ -0.3
Chmp1b1Q99LU0 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp1b1Q99LU0 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.18□□□□□ -0.3
Chmp1b1Q99LU0 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.18□□□□□ -0.3
Chmp1b1Q99LU0 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp1b1Q99LU0 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp1b1Q99LU0 Gm10275-201ENSMUST00000092620 635 ntBASIC13.18□□□□□ -0.3
Chmp1b1Q99LU0 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp1b1Q99LU0 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp1b1Q99LU0 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp1b1Q99LU0 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp1b1Q99LU0 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Chmp1b1Q99LU0 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp1b1Q99LU0 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp1b1Q99LU0 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp1b1Q99LU0 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp1b1Q99LU0 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp1b1Q99LU0 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp1b1Q99LU0 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp1b1Q99LU0 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp1b1Q99LU0 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp1b1Q99LU0 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.17□□□□□ -0.3
Chmp1b1Q99LU0 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp1b1Q99LU0 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp1b1Q99LU0 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Chmp1b1Q99LU0 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp1b1Q99LU0 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms