Protein–RNA interactions for Protein: Q99JX1

Taf11, Transcription initiation factor TFIID subunit 11, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Taf11Q99JX1 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Taf11Q99JX1 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Taf11Q99JX1 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Taf11Q99JX1 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.19□□□□□ -0.3
Taf11Q99JX1 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.19□□□□□ -0.3
Taf11Q99JX1 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Taf11Q99JX1 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.19□□□□□ -0.3
Taf11Q99JX1 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Taf11Q99JX1 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.19□□□□□ -0.3
Taf11Q99JX1 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Taf11Q99JX1 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Taf11Q99JX1 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Taf11Q99JX1 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Taf11Q99JX1 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Taf11Q99JX1 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Taf11Q99JX1 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Taf11Q99JX1 Gm13312-201ENSMUST00000119631 718 ntBASIC13.19□□□□□ -0.3
Taf11Q99JX1 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Taf11Q99JX1 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.19□□□□□ -0.3
Taf11Q99JX1 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Taf11Q99JX1 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Taf11Q99JX1 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.19□□□□□ -0.3
Taf11Q99JX1 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Taf11Q99JX1 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Taf11Q99JX1 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Taf11Q99JX1 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Taf11Q99JX1 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Taf11Q99JX1 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Taf11Q99JX1 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Taf11Q99JX1 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Taf11Q99JX1 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Taf11Q99JX1 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Taf11Q99JX1 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Taf11Q99JX1 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Taf11Q99JX1 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Taf11Q99JX1 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.19□□□□□ -0.3
Taf11Q99JX1 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Taf11Q99JX1 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Taf11Q99JX1 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Taf11Q99JX1 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Taf11Q99JX1 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Taf11Q99JX1 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Taf11Q99JX1 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Taf11Q99JX1 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Taf11Q99JX1 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Taf11Q99JX1 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Taf11Q99JX1 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Taf11Q99JX1 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Taf11Q99JX1 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Taf11Q99JX1 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Taf11Q99JX1 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Taf11Q99JX1 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Taf11Q99JX1 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Taf11Q99JX1 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Taf11Q99JX1 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Taf11Q99JX1 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Taf11Q99JX1 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Taf11Q99JX1 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Taf11Q99JX1 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Taf11Q99JX1 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Taf11Q99JX1 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Taf11Q99JX1 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Taf11Q99JX1 Gm11950-201ENSMUST00000121615 838 ntBASIC13.18□□□□□ -0.3
Taf11Q99JX1 Gm7977-201ENSMUST00000193787 748 ntBASIC13.18□□□□□ -0.3
Taf11Q99JX1 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Taf11Q99JX1 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Taf11Q99JX1 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Taf11Q99JX1 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Taf11Q99JX1 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.18□□□□□ -0.3
Taf11Q99JX1 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Taf11Q99JX1 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Taf11Q99JX1 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Taf11Q99JX1 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Taf11Q99JX1 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Taf11Q99JX1 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Taf11Q99JX1 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Taf11Q99JX1 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Taf11Q99JX1 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Taf11Q99JX1 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Taf11Q99JX1 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.17□□□□□ -0.3
Taf11Q99JX1 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Taf11Q99JX1 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Taf11Q99JX1 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Taf11Q99JX1 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.17□□□□□ -0.3
Taf11Q99JX1 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Taf11Q99JX1 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Taf11Q99JX1 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Taf11Q99JX1 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Taf11Q99JX1 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Taf11Q99JX1 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Taf11Q99JX1 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Taf11Q99JX1 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Taf11Q99JX1 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Taf11Q99JX1 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Taf11Q99JX1 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC13.17□□□□□ -0.3
Taf11Q99JX1 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.17□□□□□ -0.3
Taf11Q99JX1 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Taf11Q99JX1 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Taf11Q99JX1 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Taf11Q99JX1 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms