Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Gm8131-201ENSMUST00000213783 1570 ntBASIC16.41■□□□□ 0.22
Col20a1Q923P0 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col20a1Q923P0 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col20a1Q923P0 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col20a1Q923P0 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col20a1Q923P0 Gm5912-201ENSMUST00000122282 1438 ntBASIC16.41■□□□□ 0.22
Col20a1Q923P0 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col20a1Q923P0 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Col20a1Q923P0 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col20a1Q923P0 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col20a1Q923P0 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Col20a1Q923P0 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC16.41■□□□□ 0.22
Col20a1Q923P0 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col20a1Q923P0 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col20a1Q923P0 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC16.41■□□□□ 0.22
Col20a1Q923P0 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col20a1Q923P0 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col20a1Q923P0 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC16.41■□□□□ 0.22
Col20a1Q923P0 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col20a1Q923P0 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col20a1Q923P0 Gm6244-201ENSMUST00000178732 841 ntBASIC16.41■□□□□ 0.22
Col20a1Q923P0 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC16.41■□□□□ 0.22
Col20a1Q923P0 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col20a1Q923P0 Gm43205-201ENSMUST00000198622 1968 ntBASIC16.41■□□□□ 0.22
Col20a1Q923P0 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Col20a1Q923P0 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col20a1Q923P0 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Col20a1Q923P0 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Col20a1Q923P0 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col20a1Q923P0 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Col20a1Q923P0 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col20a1Q923P0 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Col20a1Q923P0 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.4■□□□□ 0.22
Col20a1Q923P0 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col20a1Q923P0 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col20a1Q923P0 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col20a1Q923P0 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Col20a1Q923P0 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col20a1Q923P0 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Col20a1Q923P0 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.4■□□□□ 0.22
Col20a1Q923P0 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col20a1Q923P0 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col20a1Q923P0 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col20a1Q923P0 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Col20a1Q923P0 Gm15371-201ENSMUST00000117057 784 ntBASIC16.4■□□□□ 0.22
Col20a1Q923P0 Gm16342-201ENSMUST00000124025 1025 ntBASIC16.4■□□□□ 0.22
Col20a1Q923P0 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col20a1Q923P0 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Col20a1Q923P0 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col20a1Q923P0 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col20a1Q923P0 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Col20a1Q923P0 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col20a1Q923P0 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Col20a1Q923P0 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col20a1Q923P0 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Col20a1Q923P0 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col20a1Q923P0 Gm15222-202ENSMUST00000228667 1726 ntBASIC16.39■□□□□ 0.21
Col20a1Q923P0 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Col20a1Q923P0 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col20a1Q923P0 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col20a1Q923P0 Nupl1-207ENSMUST00000225311 2475 ntBASIC16.39■□□□□ 0.21
Col20a1Q923P0 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col20a1Q923P0 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col20a1Q923P0 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col20a1Q923P0 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col20a1Q923P0 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col20a1Q923P0 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC16.39■□□□□ 0.21
Col20a1Q923P0 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col20a1Q923P0 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Col20a1Q923P0 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col20a1Q923P0 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col20a1Q923P0 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Col20a1Q923P0 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Col20a1Q923P0 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col20a1Q923P0 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Col20a1Q923P0 AC167013.2-201ENSMUST00000228520 2684 ntBASIC16.39■□□□□ 0.21
Col20a1Q923P0 Gm13689-201ENSMUST00000119360 685 ntBASIC16.39■□□□□ 0.21
Col20a1Q923P0 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col20a1Q923P0 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Col20a1Q923P0 Gm6983-201ENSMUST00000214912 628 ntBASIC16.39■□□□□ 0.21
Col20a1Q923P0 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col20a1Q923P0 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Col20a1Q923P0 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Col20a1Q923P0 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col20a1Q923P0 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col20a1Q923P0 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col20a1Q923P0 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Col20a1Q923P0 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Col20a1Q923P0 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col20a1Q923P0 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col20a1Q923P0 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col20a1Q923P0 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Col20a1Q923P0 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col20a1Q923P0 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.38■□□□□ 0.21
Col20a1Q923P0 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Col20a1Q923P0 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col20a1Q923P0 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Col20a1Q923P0 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col20a1Q923P0 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col20a1Q923P0 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms