Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdha9Q91Y11 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Pcdha9Q91Y11 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Pcdha9Q91Y11 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdha9Q91Y11 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdha9Q91Y11 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdha9Q91Y11 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdha9Q91Y11 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Pcdha9Q91Y11 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdha9Q91Y11 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdha9Q91Y11 Gm21854-201ENSMUST00000179901 471 ntBASIC14.81□□□□□ -0.04
Pcdha9Q91Y11 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdha9Q91Y11 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Pcdha9Q91Y11 Gm44719-201ENSMUST00000206404 149 ntBASIC14.81□□□□□ -0.04
Pcdha9Q91Y11 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdha9Q91Y11 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdha9Q91Y11 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Pcdha9Q91Y11 Syt7-204ENSMUST00000223586 1344 ntBASIC14.81□□□□□ -0.04
Pcdha9Q91Y11 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Pcdha9Q91Y11 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdha9Q91Y11 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdha9Q91Y11 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdha9Q91Y11 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.81□□□□□ -0.04
Pcdha9Q91Y11 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdha9Q91Y11 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdha9Q91Y11 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.81□□□□□ -0.04
Pcdha9Q91Y11 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha9Q91Y11 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Pcdha9Q91Y11 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha9Q91Y11 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha9Q91Y11 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha9Q91Y11 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha9Q91Y11 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha9Q91Y11 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Pcdha9Q91Y11 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha9Q91Y11 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha9Q91Y11 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha9Q91Y11 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha9Q91Y11 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha9Q91Y11 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.8□□□□□ -0.04
Pcdha9Q91Y11 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha9Q91Y11 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.8□□□□□ -0.04
Pcdha9Q91Y11 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha9Q91Y11 Gm15240-201ENSMUST00000118156 720 ntBASIC14.8□□□□□ -0.04
Pcdha9Q91Y11 Gm15321-201ENSMUST00000121290 288 ntBASIC14.8□□□□□ -0.04
Pcdha9Q91Y11 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.8□□□□□ -0.04
Pcdha9Q91Y11 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.8□□□□□ -0.04
Pcdha9Q91Y11 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Pcdha9Q91Y11 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha9Q91Y11 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha9Q91Y11 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.8□□□□□ -0.04
Pcdha9Q91Y11 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.8□□□□□ -0.04
Pcdha9Q91Y11 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha9Q91Y11 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.8□□□□□ -0.04
Pcdha9Q91Y11 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.8□□□□□ -0.04
Pcdha9Q91Y11 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha9Q91Y11 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha9Q91Y11 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha9Q91Y11 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.8□□□□□ -0.04
Pcdha9Q91Y11 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Pcdha9Q91Y11 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha9Q91Y11 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha9Q91Y11 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha9Q91Y11 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha9Q91Y11 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha9Q91Y11 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha9Q91Y11 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha9Q91Y11 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha9Q91Y11 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha9Q91Y11 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdha9Q91Y11 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.79□□□□□ -0.04
Pcdha9Q91Y11 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Pcdha9Q91Y11 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdha9Q91Y11 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.79□□□□□ -0.04
Pcdha9Q91Y11 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Pcdha9Q91Y11 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdha9Q91Y11 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.79□□□□□ -0.04
Pcdha9Q91Y11 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdha9Q91Y11 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Pcdha9Q91Y11 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdha9Q91Y11 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.79□□□□□ -0.04
Pcdha9Q91Y11 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.79□□□□□ -0.04
Pcdha9Q91Y11 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Pcdha9Q91Y11 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdha9Q91Y11 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdha9Q91Y11 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdha9Q91Y11 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdha9Q91Y11 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Pcdha9Q91Y11 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdha9Q91Y11 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdha9Q91Y11 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Pcdha9Q91Y11 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Pcdha9Q91Y11 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdha9Q91Y11 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdha9Q91Y11 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Pcdha9Q91Y11 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdha9Q91Y11 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdha9Q91Y11 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdha9Q91Y11 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdha9Q91Y11 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms