Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm1Q8VC85 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm1Q8VC85 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm1Q8VC85 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm1Q8VC85 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm1Q8VC85 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm1Q8VC85 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm1Q8VC85 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm1Q8VC85 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm1Q8VC85 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm1Q8VC85 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm1Q8VC85 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm1Q8VC85 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Lsm1Q8VC85 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm1Q8VC85 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm1Q8VC85 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm1Q8VC85 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Lsm1Q8VC85 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Lsm1Q8VC85 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm1Q8VC85 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Lsm1Q8VC85 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm1Q8VC85 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm1Q8VC85 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm1Q8VC85 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm1Q8VC85 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.37□□□□□ -0.27
Lsm1Q8VC85 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.37□□□□□ -0.27
Lsm1Q8VC85 Mir6990-201ENSMUST00000183724 91 ntBASIC13.37□□□□□ -0.27
Lsm1Q8VC85 Gm18766-201ENSMUST00000189811 808 ntBASIC13.37□□□□□ -0.27
Lsm1Q8VC85 Gm29541-201ENSMUST00000191351 678 ntBASIC13.37□□□□□ -0.27
Lsm1Q8VC85 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.37□□□□□ -0.27
Lsm1Q8VC85 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm1Q8VC85 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm1Q8VC85 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm1Q8VC85 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm1Q8VC85 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm1Q8VC85 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm1Q8VC85 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm1Q8VC85 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm1Q8VC85 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm1Q8VC85 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm1Q8VC85 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm1Q8VC85 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm1Q8VC85 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm1Q8VC85 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm1Q8VC85 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.37□□□□□ -0.27
Lsm1Q8VC85 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
Lsm1Q8VC85 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm1Q8VC85 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm1Q8VC85 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm1Q8VC85 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm1Q8VC85 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm1Q8VC85 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm1Q8VC85 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.36□□□□□ -0.27
Lsm1Q8VC85 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm1Q8VC85 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm1Q8VC85 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm1Q8VC85 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Lsm1Q8VC85 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm1Q8VC85 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm1Q8VC85 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm1Q8VC85 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm1Q8VC85 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm1Q8VC85 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm1Q8VC85 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm1Q8VC85 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm1Q8VC85 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm1Q8VC85 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm1Q8VC85 Gm5566-201ENSMUST00000116118 459 ntBASIC13.36□□□□□ -0.27
Lsm1Q8VC85 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm1Q8VC85 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.36□□□□□ -0.27
Lsm1Q8VC85 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm1Q8VC85 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.36□□□□□ -0.27
Lsm1Q8VC85 Gm43125-201ENSMUST00000201724 730 ntBASIC13.36□□□□□ -0.27
Lsm1Q8VC85 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Lsm1Q8VC85 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Lsm1Q8VC85 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.36□□□□□ -0.27
Lsm1Q8VC85 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Lsm1Q8VC85 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.36□□□□□ -0.27
Lsm1Q8VC85 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm1Q8VC85 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm1Q8VC85 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Lsm1Q8VC85 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm1Q8VC85 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm1Q8VC85 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm1Q8VC85 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm1Q8VC85 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm1Q8VC85 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Lsm1Q8VC85 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Lsm1Q8VC85 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.36□□□□□ -0.27
Lsm1Q8VC85 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm1Q8VC85 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm1Q8VC85 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm1Q8VC85 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.36□□□□□ -0.27
Lsm1Q8VC85 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm1Q8VC85 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm1Q8VC85 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm1Q8VC85 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm1Q8VC85 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm1Q8VC85 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm1Q8VC85 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 92 ms