Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vcpip1Q8CDG3 Gm18049-201ENSMUST00000208909 581 ntBASIC14.99□□□□□ -0.01
Vcpip1Q8CDG3 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vcpip1Q8CDG3 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vcpip1Q8CDG3 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vcpip1Q8CDG3 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Vcpip1Q8CDG3 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Vcpip1Q8CDG3 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vcpip1Q8CDG3 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vcpip1Q8CDG3 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vcpip1Q8CDG3 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vcpip1Q8CDG3 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vcpip1Q8CDG3 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vcpip1Q8CDG3 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vcpip1Q8CDG3 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Vcpip1Q8CDG3 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vcpip1Q8CDG3 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vcpip1Q8CDG3 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vcpip1Q8CDG3 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vcpip1Q8CDG3 BC001981-202ENSMUST00000191393 1545 ntBASIC14.98□□□□□ -0.01
Vcpip1Q8CDG3 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vcpip1Q8CDG3 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Vcpip1Q8CDG3 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vcpip1Q8CDG3 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vcpip1Q8CDG3 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vcpip1Q8CDG3 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vcpip1Q8CDG3 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vcpip1Q8CDG3 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vcpip1Q8CDG3 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vcpip1Q8CDG3 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vcpip1Q8CDG3 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vcpip1Q8CDG3 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vcpip1Q8CDG3 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vcpip1Q8CDG3 Gm13015-201ENSMUST00000118674 204 ntBASIC14.98□□□□□ -0.01
Vcpip1Q8CDG3 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vcpip1Q8CDG3 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.98□□□□□ -0.01
Vcpip1Q8CDG3 Mir6990-201ENSMUST00000183724 91 ntBASIC14.98□□□□□ -0.01
Vcpip1Q8CDG3 AA619741-201ENSMUST00000195095 646 ntBASIC14.98□□□□□ -0.01
Vcpip1Q8CDG3 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Vcpip1Q8CDG3 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Vcpip1Q8CDG3 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vcpip1Q8CDG3 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vcpip1Q8CDG3 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Vcpip1Q8CDG3 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Vcpip1Q8CDG3 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.98□□□□□ -0.01
Vcpip1Q8CDG3 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vcpip1Q8CDG3 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vcpip1Q8CDG3 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.97□□□□□ -0.01
Vcpip1Q8CDG3 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vcpip1Q8CDG3 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vcpip1Q8CDG3 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vcpip1Q8CDG3 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vcpip1Q8CDG3 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Vcpip1Q8CDG3 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vcpip1Q8CDG3 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Vcpip1Q8CDG3 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vcpip1Q8CDG3 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Vcpip1Q8CDG3 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vcpip1Q8CDG3 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.97□□□□□ -0.01
Vcpip1Q8CDG3 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Vcpip1Q8CDG3 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Vcpip1Q8CDG3 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vcpip1Q8CDG3 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vcpip1Q8CDG3 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Vcpip1Q8CDG3 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vcpip1Q8CDG3 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.97□□□□□ -0.01
Vcpip1Q8CDG3 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vcpip1Q8CDG3 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vcpip1Q8CDG3 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.97□□□□□ -0.01
Vcpip1Q8CDG3 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vcpip1Q8CDG3 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vcpip1Q8CDG3 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Vcpip1Q8CDG3 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.97□□□□□ -0.01
Vcpip1Q8CDG3 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vcpip1Q8CDG3 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Vcpip1Q8CDG3 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vcpip1Q8CDG3 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Vcpip1Q8CDG3 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vcpip1Q8CDG3 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vcpip1Q8CDG3 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vcpip1Q8CDG3 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vcpip1Q8CDG3 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vcpip1Q8CDG3 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Vcpip1Q8CDG3 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vcpip1Q8CDG3 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Vcpip1Q8CDG3 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vcpip1Q8CDG3 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vcpip1Q8CDG3 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.96□□□□□ -0.01
Vcpip1Q8CDG3 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.96□□□□□ -0.01
Vcpip1Q8CDG3 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Vcpip1Q8CDG3 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Vcpip1Q8CDG3 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Vcpip1Q8CDG3 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Vcpip1Q8CDG3 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Vcpip1Q8CDG3 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.96□□□□□ -0.01
Vcpip1Q8CDG3 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.96□□□□□ -0.01
Vcpip1Q8CDG3 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.96□□□□□ -0.01
Vcpip1Q8CDG3 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Vcpip1Q8CDG3 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vcpip1Q8CDG3 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms