Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vma21Q78T54 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Vma21Q78T54 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vma21Q78T54 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vma21Q78T54 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vma21Q78T54 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vma21Q78T54 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vma21Q78T54 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Vma21Q78T54 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vma21Q78T54 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vma21Q78T54 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Vma21Q78T54 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vma21Q78T54 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vma21Q78T54 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vma21Q78T54 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.34□□□□□ -0.59
Vma21Q78T54 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Vma21Q78T54 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vma21Q78T54 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vma21Q78T54 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC11.34□□□□□ -0.59
Vma21Q78T54 Gm1401-201ENSMUST00000122048 772 ntBASIC11.34□□□□□ -0.59
Vma21Q78T54 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vma21Q78T54 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vma21Q78T54 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vma21Q78T54 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC11.34□□□□□ -0.59
Vma21Q78T54 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC11.34□□□□□ -0.59
Vma21Q78T54 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC11.34□□□□□ -0.59
Vma21Q78T54 AC131187.1-201ENSMUST00000224567 809 ntBASIC11.34□□□□□ -0.59
Vma21Q78T54 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vma21Q78T54 Gpr146-202ENSMUST00000053120 1040 ntBASIC11.34□□□□□ -0.59
Vma21Q78T54 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vma21Q78T54 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vma21Q78T54 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Vma21Q78T54 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Vma21Q78T54 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Vma21Q78T54 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Vma21Q78T54 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vma21Q78T54 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Vma21Q78T54 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vma21Q78T54 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Vma21Q78T54 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Vma21Q78T54 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vma21Q78T54 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vma21Q78T54 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Vma21Q78T54 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vma21Q78T54 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.59
Vma21Q78T54 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Vma21Q78T54 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vma21Q78T54 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vma21Q78T54 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Vma21Q78T54 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vma21Q78T54 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Vma21Q78T54 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vma21Q78T54 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Vma21Q78T54 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vma21Q78T54 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Vma21Q78T54 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Vma21Q78T54 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC11.33□□□□□ -0.6
Vma21Q78T54 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Vma21Q78T54 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC11.33□□□□□ -0.6
Vma21Q78T54 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Vma21Q78T54 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC11.33□□□□□ -0.6
Vma21Q78T54 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Vma21Q78T54 Gm45683-201ENSMUST00000210825 1247 ntBASIC11.33□□□□□ -0.6
Vma21Q78T54 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC11.33□□□□□ -0.6
Vma21Q78T54 AC121598.1-201ENSMUST00000228224 1019 ntBASIC11.33□□□□□ -0.6
Vma21Q78T54 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vma21Q78T54 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vma21Q78T54 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Vma21Q78T54 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.33□□□□□ -0.6
Vma21Q78T54 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vma21Q78T54 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vma21Q78T54 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC11.33□□□□□ -0.6
Vma21Q78T54 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC11.33□□□□□ -0.6
Vma21Q78T54 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vma21Q78T54 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Vma21Q78T54 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vma21Q78T54 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vma21Q78T54 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Vma21Q78T54 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vma21Q78T54 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Vma21Q78T54 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC11.33□□□□□ -0.6
Vma21Q78T54 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vma21Q78T54 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Vma21Q78T54 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.33□□□□□ -0.6
Vma21Q78T54 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vma21Q78T54 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Vma21Q78T54 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Vma21Q78T54 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vma21Q78T54 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Vma21Q78T54 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vma21Q78T54 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Vma21Q78T54 Gm15957-201ENSMUST00000118893 974 ntBASIC11.32□□□□□ -0.6
Vma21Q78T54 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC11.32□□□□□ -0.6
Vma21Q78T54 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Vma21Q78T54 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC11.32□□□□□ -0.6
Vma21Q78T54 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC11.32□□□□□ -0.6
Vma21Q78T54 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Vma21Q78T54 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC11.32□□□□□ -0.6
Vma21Q78T54 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC11.32□□□□□ -0.6
Vma21Q78T54 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms