Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Mir1897-201ENSMUST00000122581 272 ntBASIC14.16□□□□□ -0.14
Sp140Q6NSQ5 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sp140Q6NSQ5 Gm37935-201ENSMUST00000192012 982 ntBASIC14.16□□□□□ -0.14
Sp140Q6NSQ5 Gm37714-201ENSMUST00000194742 342 ntBASIC14.16□□□□□ -0.14
Sp140Q6NSQ5 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.16□□□□□ -0.14
Sp140Q6NSQ5 Gm18027-201ENSMUST00000218947 619 ntBASIC14.16□□□□□ -0.14
Sp140Q6NSQ5 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.16□□□□□ -0.14
Sp140Q6NSQ5 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sp140Q6NSQ5 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sp140Q6NSQ5 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Sp140Q6NSQ5 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sp140Q6NSQ5 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.16□□□□□ -0.14
Sp140Q6NSQ5 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Sp140Q6NSQ5 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sp140Q6NSQ5 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sp140Q6NSQ5 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Sp140Q6NSQ5 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Sp140Q6NSQ5 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sp140Q6NSQ5 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sp140Q6NSQ5 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sp140Q6NSQ5 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sp140Q6NSQ5 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sp140Q6NSQ5 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sp140Q6NSQ5 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sp140Q6NSQ5 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sp140Q6NSQ5 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Sp140Q6NSQ5 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sp140Q6NSQ5 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sp140Q6NSQ5 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sp140Q6NSQ5 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sp140Q6NSQ5 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sp140Q6NSQ5 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sp140Q6NSQ5 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Sp140Q6NSQ5 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sp140Q6NSQ5 Gm15693-201ENSMUST00000120470 637 ntBASIC14.15□□□□□ -0.14
Sp140Q6NSQ5 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sp140Q6NSQ5 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sp140Q6NSQ5 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Sp140Q6NSQ5 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.15□□□□□ -0.14
Sp140Q6NSQ5 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sp140Q6NSQ5 Gm2445-201ENSMUST00000182798 989 ntBASIC14.15□□□□□ -0.14
Sp140Q6NSQ5 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.15□□□□□ -0.14
Sp140Q6NSQ5 Gm8396-201ENSMUST00000057361 823 ntBASIC14.15□□□□□ -0.14
Sp140Q6NSQ5 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.15□□□□□ -0.14
Sp140Q6NSQ5 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sp140Q6NSQ5 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sp140Q6NSQ5 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Sp140Q6NSQ5 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sp140Q6NSQ5 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sp140Q6NSQ5 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sp140Q6NSQ5 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sp140Q6NSQ5 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sp140Q6NSQ5 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sp140Q6NSQ5 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Sp140Q6NSQ5 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sp140Q6NSQ5 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Sp140Q6NSQ5 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Sp140Q6NSQ5 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sp140Q6NSQ5 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.14□□□□□ -0.15
Sp140Q6NSQ5 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Sp140Q6NSQ5 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sp140Q6NSQ5 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sp140Q6NSQ5 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sp140Q6NSQ5 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.14□□□□□ -0.15
Sp140Q6NSQ5 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sp140Q6NSQ5 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sp140Q6NSQ5 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Sp140Q6NSQ5 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sp140Q6NSQ5 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sp140Q6NSQ5 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.14□□□□□ -0.15
Sp140Q6NSQ5 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sp140Q6NSQ5 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sp140Q6NSQ5 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sp140Q6NSQ5 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sp140Q6NSQ5 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sp140Q6NSQ5 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sp140Q6NSQ5 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Sp140Q6NSQ5 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.14□□□□□ -0.15
Sp140Q6NSQ5 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sp140Q6NSQ5 Gm8410-201ENSMUST00000117225 605 ntBASIC14.14□□□□□ -0.15
Sp140Q6NSQ5 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.14□□□□□ -0.15
Sp140Q6NSQ5 Gm25948-201ENSMUST00000175334 112 ntBASIC14.14□□□□□ -0.15
Sp140Q6NSQ5 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.14□□□□□ -0.15
Sp140Q6NSQ5 Shd-206ENSMUST00000225145 998 ntBASIC14.14□□□□□ -0.15
Sp140Q6NSQ5 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sp140Q6NSQ5 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sp140Q6NSQ5 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Sp140Q6NSQ5 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sp140Q6NSQ5 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sp140Q6NSQ5 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sp140Q6NSQ5 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sp140Q6NSQ5 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sp140Q6NSQ5 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sp140Q6NSQ5 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.14□□□□□ -0.15
Sp140Q6NSQ5 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sp140Q6NSQ5 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.14□□□□□ -0.15
Sp140Q6NSQ5 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sp140Q6NSQ5 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sp140Q6NSQ5 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Sp140Q6NSQ5 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms