Protein–RNA interactions for Protein: Q62249

Sox19, Protein SOX-19 (Fragment), mousemouse

Predictions only

Length 55 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox19Q62249 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox19Q62249 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sox19Q62249 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sox19Q62249 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox19Q62249 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox19Q62249 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox19Q62249 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox19Q62249 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox19Q62249 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox19Q62249 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox19Q62249 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox19Q62249 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC11.88□□□□□ -0.51
Sox19Q62249 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox19Q62249 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Sox19Q62249 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox19Q62249 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Sox19Q62249 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox19Q62249 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox19Q62249 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Sox19Q62249 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox19Q62249 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Sox19Q62249 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sox19Q62249 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox19Q62249 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC11.88□□□□□ -0.51
Sox19Q62249 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox19Q62249 Gm16198-201ENSMUST00000118766 670 ntBASIC11.88□□□□□ -0.51
Sox19Q62249 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
Sox19Q62249 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC11.88□□□□□ -0.51
Sox19Q62249 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Sox19Q62249 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC11.88□□□□□ -0.51
Sox19Q62249 Mir7036b-201ENSMUST00000184791 63 ntBASIC11.88□□□□□ -0.51
Sox19Q62249 Gm27459-201ENSMUST00000184860 107 ntBASIC11.88□□□□□ -0.51
Sox19Q62249 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC11.88□□□□□ -0.51
Sox19Q62249 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC11.88□□□□□ -0.51
Sox19Q62249 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC11.88□□□□□ -0.51
Sox19Q62249 Gm44608-201ENSMUST00000206827 855 ntBASIC11.88□□□□□ -0.51
Sox19Q62249 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sox19Q62249 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Sox19Q62249 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Sox19Q62249 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Sox19Q62249 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox19Q62249 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Sox19Q62249 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sox19Q62249 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox19Q62249 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.88□□□□□ -0.51
Sox19Q62249 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Sox19Q62249 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox19Q62249 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox19Q62249 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox19Q62249 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox19Q62249 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sox19Q62249 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Sox19Q62249 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox19Q62249 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sox19Q62249 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sox19Q62249 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox19Q62249 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox19Q62249 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox19Q62249 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sox19Q62249 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Sox19Q62249 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox19Q62249 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox19Q62249 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox19Q62249 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Sox19Q62249 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox19Q62249 Gm7153-201ENSMUST00000117092 455 ntBASIC11.87□□□□□ -0.51
Sox19Q62249 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sox19Q62249 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Sox19Q62249 Gm27300-201ENSMUST00000184085 97 ntBASIC11.87□□□□□ -0.51
Sox19Q62249 Gm27335-201ENSMUST00000184758 97 ntBASIC11.87□□□□□ -0.51
Sox19Q62249 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC11.87□□□□□ -0.51
Sox19Q62249 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC11.87□□□□□ -0.51
Sox19Q62249 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox19Q62249 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox19Q62249 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Sox19Q62249 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC11.87□□□□□ -0.51
Sox19Q62249 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC11.87□□□□□ -0.51
Sox19Q62249 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sox19Q62249 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox19Q62249 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox19Q62249 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sox19Q62249 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Sox19Q62249 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox19Q62249 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox19Q62249 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox19Q62249 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.87□□□□□ -0.51
Sox19Q62249 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox19Q62249 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.86□□□□□ -0.51
Sox19Q62249 Gm11873-201ENSMUST00000117877 1304 ntBASIC11.86□□□□□ -0.51
Sox19Q62249 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox19Q62249 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sox19Q62249 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox19Q62249 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sox19Q62249 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.86□□□□□ -0.51
Sox19Q62249 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Sox19Q62249 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox19Q62249 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox19Q62249 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox19Q62249 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Sox19Q62249 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms