Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VcanQ62059 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VcanQ62059 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VcanQ62059 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
VcanQ62059 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
VcanQ62059 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
VcanQ62059 AC174797.2-202ENSMUST00000225729 568 ntBASIC12.8□□□□□ -0.36
VcanQ62059 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
VcanQ62059 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
VcanQ62059 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VcanQ62059 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VcanQ62059 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.79□□□□□ -0.36
VcanQ62059 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VcanQ62059 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VcanQ62059 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VcanQ62059 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VcanQ62059 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
VcanQ62059 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.79□□□□□ -0.36
VcanQ62059 Gm13385-201ENSMUST00000121089 220 ntBASIC12.79□□□□□ -0.36
VcanQ62059 Gm15276-201ENSMUST00000145953 498 ntBASIC12.79□□□□□ -0.36
VcanQ62059 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VcanQ62059 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VcanQ62059 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VcanQ62059 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VcanQ62059 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
VcanQ62059 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
VcanQ62059 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.79□□□□□ -0.36
VcanQ62059 Gm6580-201ENSMUST00000117504 1357 ntBASIC12.79□□□□□ -0.36
VcanQ62059 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
VcanQ62059 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
VcanQ62059 Rn7s6-201ENSMUST00000175005 291 ntBASIC12.79□□□□□ -0.36
VcanQ62059 Gm27552-201ENSMUST00000183351 62 ntBASIC12.79□□□□□ -0.36
VcanQ62059 Gm27844-201ENSMUST00000183613 62 ntBASIC12.79□□□□□ -0.36
VcanQ62059 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.79□□□□□ -0.36
VcanQ62059 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
VcanQ62059 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
VcanQ62059 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VcanQ62059 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VcanQ62059 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VcanQ62059 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
VcanQ62059 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
VcanQ62059 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
VcanQ62059 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VcanQ62059 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VcanQ62059 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.78□□□□□ -0.36
VcanQ62059 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
VcanQ62059 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.78□□□□□ -0.36
VcanQ62059 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
VcanQ62059 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
VcanQ62059 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VcanQ62059 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.78□□□□□ -0.36
VcanQ62059 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VcanQ62059 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VcanQ62059 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
VcanQ62059 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
VcanQ62059 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
VcanQ62059 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC12.78□□□□□ -0.36
VcanQ62059 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.78□□□□□ -0.36
VcanQ62059 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.78□□□□□ -0.36
VcanQ62059 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.78□□□□□ -0.36
VcanQ62059 Gm18393-201ENSMUST00000208349 1131 ntBASIC12.78□□□□□ -0.36
VcanQ62059 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VcanQ62059 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VcanQ62059 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.78□□□□□ -0.36
VcanQ62059 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.78□□□□□ -0.36
VcanQ62059 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
VcanQ62059 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
VcanQ62059 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.78□□□□□ -0.36
VcanQ62059 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VcanQ62059 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VcanQ62059 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VcanQ62059 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VcanQ62059 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VcanQ62059 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
VcanQ62059 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VcanQ62059 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VcanQ62059 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.78□□□□□ -0.36
VcanQ62059 Gm5778-201ENSMUST00000171003 1072 ntBASIC12.78□□□□□ -0.36
VcanQ62059 Gm8365-201ENSMUST00000197334 648 ntBASIC12.78□□□□□ -0.36
VcanQ62059 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VcanQ62059 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VcanQ62059 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.78□□□□□ -0.36
VcanQ62059 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
VcanQ62059 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
VcanQ62059 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
VcanQ62059 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.77□□□□□ -0.36
VcanQ62059 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC12.77□□□□□ -0.36
VcanQ62059 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC12.77□□□□□ -0.36
VcanQ62059 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.77□□□□□ -0.36
VcanQ62059 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
VcanQ62059 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
VcanQ62059 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.77□□□□□ -0.37
VcanQ62059 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.77□□□□□ -0.37
VcanQ62059 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
VcanQ62059 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC12.77□□□□□ -0.37
VcanQ62059 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.77□□□□□ -0.37
VcanQ62059 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
VcanQ62059 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.77□□□□□ -0.37
VcanQ62059 Gm38144-201ENSMUST00000192790 465 ntBASIC12.77□□□□□ -0.37
VcanQ62059 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms