Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox17Q61473 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox17Q61473 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.07□□□□□ -0.32
Sox17Q61473 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox17Q61473 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Sox17Q61473 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox17Q61473 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox17Q61473 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Sox17Q61473 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.07□□□□□ -0.32
Sox17Q61473 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Sox17Q61473 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Sox17Q61473 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox17Q61473 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Sox17Q61473 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.07□□□□□ -0.32
Sox17Q61473 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox17Q61473 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.07□□□□□ -0.32
Sox17Q61473 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Sox17Q61473 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Sox17Q61473 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Sox17Q61473 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sox17Q61473 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.07□□□□□ -0.32
Sox17Q61473 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Sox17Q61473 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.07□□□□□ -0.32
Sox17Q61473 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox17Q61473 Gm15590-201ENSMUST00000078419 552 ntBASIC13.07□□□□□ -0.32
Sox17Q61473 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Sox17Q61473 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Sox17Q61473 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sox17Q61473 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox17Q61473 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sox17Q61473 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sox17Q61473 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Sox17Q61473 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Sox17Q61473 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox17Q61473 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox17Q61473 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox17Q61473 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox17Q61473 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.06□□□□□ -0.32
Sox17Q61473 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox17Q61473 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox17Q61473 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sox17Q61473 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox17Q61473 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Sox17Q61473 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox17Q61473 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Sox17Q61473 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox17Q61473 Gm24589-201ENSMUST00000116692 94 ntBASIC13.06□□□□□ -0.32
Sox17Q61473 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sox17Q61473 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Sox17Q61473 Gm27628-201ENSMUST00000184911 107 ntBASIC13.06□□□□□ -0.32
Sox17Q61473 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox17Q61473 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.06□□□□□ -0.32
Sox17Q61473 Gm10060-201ENSMUST00000212002 111 ntBASIC13.06□□□□□ -0.32
Sox17Q61473 AC158538.1-201ENSMUST00000225870 294 ntBASIC13.06□□□□□ -0.32
Sox17Q61473 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox17Q61473 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox17Q61473 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.06□□□□□ -0.32
Sox17Q61473 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sox17Q61473 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox17Q61473 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sox17Q61473 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox17Q61473 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Sox17Q61473 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox17Q61473 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox17Q61473 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Sox17Q61473 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.06□□□□□ -0.32
Sox17Q61473 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox17Q61473 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox17Q61473 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox17Q61473 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox17Q61473 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox17Q61473 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox17Q61473 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.06□□□□□ -0.32
Sox17Q61473 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox17Q61473 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sox17Q61473 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sox17Q61473 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sox17Q61473 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox17Q61473 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Sox17Q61473 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Sox17Q61473 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sox17Q61473 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox17Q61473 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Sox17Q61473 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox17Q61473 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.05□□□□□ -0.32
Sox17Q61473 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox17Q61473 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox17Q61473 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Sox17Q61473 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox17Q61473 Gm5177-201ENSMUST00000183092 997 ntBASIC13.05□□□□□ -0.32
Sox17Q61473 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox17Q61473 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox17Q61473 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Sox17Q61473 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox17Q61473 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox17Q61473 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox17Q61473 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sox17Q61473 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox17Q61473 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox17Q61473 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms