Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Six4Q61321 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Six4Q61321 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Six4Q61321 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Six4Q61321 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Six4Q61321 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Six4Q61321 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Six4Q61321 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Six4Q61321 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Six4Q61321 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Six4Q61321 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.05□□□□□ -0.16
Six4Q61321 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.05□□□□□ -0.16
Six4Q61321 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Six4Q61321 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Six4Q61321 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Six4Q61321 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Six4Q61321 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Six4Q61321 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.05□□□□□ -0.16
Six4Q61321 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Six4Q61321 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six4Q61321 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six4Q61321 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Six4Q61321 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six4Q61321 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six4Q61321 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.04□□□□□ -0.16
Six4Q61321 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six4Q61321 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Six4Q61321 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six4Q61321 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six4Q61321 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six4Q61321 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.04□□□□□ -0.16
Six4Q61321 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six4Q61321 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six4Q61321 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Six4Q61321 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six4Q61321 Gm22189-201ENSMUST00000103822 86 ntBASIC14.04□□□□□ -0.16
Six4Q61321 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Six4Q61321 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Six4Q61321 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.04□□□□□ -0.16
Six4Q61321 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.04□□□□□ -0.16
Six4Q61321 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.04□□□□□ -0.16
Six4Q61321 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.04□□□□□ -0.16
Six4Q61321 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six4Q61321 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six4Q61321 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.04□□□□□ -0.16
Six4Q61321 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Six4Q61321 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six4Q61321 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six4Q61321 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six4Q61321 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.04□□□□□ -0.16
Six4Q61321 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six4Q61321 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six4Q61321 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six4Q61321 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six4Q61321 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six4Q61321 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six4Q61321 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six4Q61321 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Six4Q61321 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six4Q61321 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six4Q61321 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Six4Q61321 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Six4Q61321 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Six4Q61321 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.03□□□□□ -0.16
Six4Q61321 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Six4Q61321 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Six4Q61321 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Six4Q61321 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Six4Q61321 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Six4Q61321 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Six4Q61321 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Six4Q61321 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Six4Q61321 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Six4Q61321 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Six4Q61321 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Six4Q61321 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Six4Q61321 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Six4Q61321 Mir698-201ENSMUST00000102164 109 ntBASIC14.03□□□□□ -0.16
Six4Q61321 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Six4Q61321 Gm6912-201ENSMUST00000117218 544 ntBASIC14.03□□□□□ -0.16
Six4Q61321 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.03□□□□□ -0.16
Six4Q61321 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.03□□□□□ -0.16
Six4Q61321 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Six4Q61321 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Six4Q61321 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Six4Q61321 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Six4Q61321 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Six4Q61321 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Six4Q61321 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.03□□□□□ -0.16
Six4Q61321 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Six4Q61321 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Six4Q61321 Gm2423-201ENSMUST00000074863 733 ntBASIC14.03□□□□□ -0.16
Six4Q61321 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Six4Q61321 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Six4Q61321 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Six4Q61321 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Six4Q61321 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Six4Q61321 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Six4Q61321 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Six4Q61321 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms