Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC10.86□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC10.85□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Gm12882-201ENSMUST00000121696 517 ntBASIC10.85□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC10.85□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC10.85□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC10.85□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC10.85□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC10.85□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Gm9347-201ENSMUST00000211473 1607 ntBASIC10.84□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Gm6184-201ENSMUST00000120403 1261 ntBASIC10.84□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC10.84□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC10.84□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC10.84□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC10.84□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.67
Trav15-1-dv6-1Q5R1D2 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC10.83□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Gm16198-201ENSMUST00000118766 670 ntBASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms